RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 TSPYL2Q9H2G4 693 aaPredicted RBP19.55■□□□□ 0.72
TVP23A-202ENST00000456096 JMJD4Q9H9V9 463 aa19.55■□□□□ 0.72
TVP23A-202ENST00000456096 PARP1P09874 1014 aaKnown RBP19.54■□□□□ 0.72
TVP23A-202ENST00000456096 NUCB1Q02818 461 aa19.54■□□□□ 0.72
TVP23A-202ENST00000456096 AAMPQ13685 434 aa19.54■□□□□ 0.72
TVP23A-202ENST00000456096 FBXO11Q86XK2 927 aa19.54■□□□□ 0.72
TVP23A-202ENST00000456096 HERC6Q8IVU3 1022 aa19.54■□□□□ 0.72
TVP23A-202ENST00000456096 UHRF1Q96T88 793 aaPredicted RBP19.54■□□□□ 0.72
TVP23A-202ENST00000456096 MRPL11Q9Y3B7 192 aaKnown RBP19.54■□□□□ 0.72
TVP23A-202ENST00000456096 TCF20Q9UGU0 1960 aaKnown RBP19.53■□□□□ 0.72
TVP23A-202ENST00000456096 EPOPA6NHQ4 379 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 ARHGEF15O94989 841 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
TVP23A-202ENST00000456096 POU3F3P20264 500 aaPredicted RBP19.53■□□□□ 0.72
TVP23A-202ENST00000456096 CASTP20810 708 aaKnown RBP19.53■□□□□ 0.72
TVP23A-202ENST00000456096 TFF2Q03403 129 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 TAP1Q03518 808 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 GPNMBQ14956 572 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 IMMTQ16891 758 aaKnown RBP19.53■□□□□ 0.72
TVP23A-202ENST00000456096 ARHGEF16Q5VV41 709 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 SESTD1Q86VW0 696 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 IL27Q8NEV9 243 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 AFAP1L1Q8TED9 768 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 DSCC1Q9BVC3 393 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 DDX41Q9UJV9 622 aaKnown RBP19.53■□□□□ 0.72
TVP23A-202ENST00000456096 MTCH2Q9Y6C9 303 aa19.53■□□□□ 0.72
TVP23A-202ENST00000456096 KIF28PB7ZC32 967 aa19.52■□□□□ 0.72
TVP23A-202ENST00000456096 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
TVP23A-202ENST00000456096 DGKDQ16760 1214 aa19.52■□□□□ 0.72
TVP23A-202ENST00000456096 CCDC155Q8N6L0 562 aa19.52■□□□□ 0.72
TVP23A-202ENST00000456096 CAGE1Q8TC20 777 aa19.52■□□□□ 0.72
TVP23A-202ENST00000456096 ARNTL2Q8WYA1 636 aa19.52■□□□□ 0.72
TVP23A-202ENST00000456096 DHX38Q92620 1227 aaKnown RBP19.52■□□□□ 0.72
TVP23A-202ENST00000456096 MYH7BA7E2Y1 1941 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 HIP1O00291 1037 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 GTPBP6O43824 516 aaPredicted RBP19.51■□□□□ 0.71
TVP23A-202ENST00000456096 BAIAP3O94812 1187 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 CFBP00751 764 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 NR3C2P08235 984 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 BMP1P13497 986 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 SELPP16109 830 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 SKIV2LQ15477 1246 aaKnown RBP19.51■□□□□ 0.71
TVP23A-202ENST00000456096 KRT40Q6A162 431 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 UBAC1Q9BSL1 405 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 KRT23Q9C075 422 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 PXMP2Q9NR77 195 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 HDAC6Q9UBN7 1215 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 CTNNA3Q9UI47 895 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 PTPRSQ13332 1948 aa19.51■□□□□ 0.71
TVP23A-202ENST00000456096 OPLAHO14841 1288 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 KCNJ6P48051 423 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 PSEN2P49810 448 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 LAMC2Q13753 1193 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 C7orf31Q8N865 590 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 EMID1Q96A84 441 aaPredicted RBP19.5■□□□□ 0.71
TVP23A-202ENST00000456096 NECAB3Q96P71 396 aaPredicted RBP19.5■□□□□ 0.71
TVP23A-202ENST00000456096 AMNQ9BXJ7 453 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 GTF2IRD1Q9UHL9 959 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 MRVI1Q9Y6F6 885 aa19.5■□□□□ 0.71
TVP23A-202ENST00000456096 TLL1O43897 1013 aa19.49■□□□□ 0.71
TVP23A-202ENST00000456096 COL9A1P20849 921 aa19.49■□□□□ 0.71
TVP23A-202ENST00000456096 WDR5P61964 334 aaKnown RBP19.49■□□□□ 0.71
TVP23A-202ENST00000456096 IFIT1BQ5T764 474 aaKnown RBP19.49■□□□□ 0.71
TVP23A-202ENST00000456096 LRRC8DQ7L1W4 858 aa19.49■□□□□ 0.71
TVP23A-202ENST00000456096 SPRED2Q7Z698 418 aa19.49■□□□□ 0.71
TVP23A-202ENST00000456096 TMCO2Q7Z6W1 182 aaPredicted RBP19.49■□□□□ 0.71
TVP23A-202ENST00000456096 ALG1Q9BT22 464 aa19.49■□□□□ 0.71
TVP23A-202ENST00000456096 CNNM2Q9H8M5 875 aa19.49■□□□□ 0.71
TVP23A-202ENST00000456096 LCHNA4D1U4 455 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 KLRF2D3W0D1 207 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 RBAK-RBAKDNI3L0D1 243 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 PPP1R11O60927 126 aaPredicted RBP19.48■□□□□ 0.71
TVP23A-202ENST00000456096 NBNO60934 754 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 ZNF286BP0CG31 522 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 CKBP12277 381 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 MYCLP12524 364 aaPredicted RBP19.48■□□□□ 0.71
TVP23A-202ENST00000456096 HSD17B4P51659 736 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 KCNQ1P51787 676 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 RBL2Q08999 1139 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 MFSD10Q14728 455 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 SEC23AQ15436 765 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 KIAA0753Q2KHM9 967 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 DHX37Q8IY37 1157 aaKnown RBP19.48■□□□□ 0.71
TVP23A-202ENST00000456096 PPTC7Q8NI37 304 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 IL25Q9H293 177 aa19.48■□□□□ 0.71
TVP23A-202ENST00000456096 RGS20O76081 388 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 F2P00734 622 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 CXCL10P02778 98 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 HOXA13P31271 388 aaPredicted RBP19.47■□□□□ 0.71
TVP23A-202ENST00000456096 DEFB103AP81534 67 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 GHRHRQ02643 423 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 GRB10Q13322 594 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 AAK1Q2M2I8 961 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 TCTN1Q2MV58 587 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 CNKSR3Q6P9H4 555 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 STOX1Q6ZVD7 989 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 CYB5R4Q7L1T6 521 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 MTMR8Q96EF0 704 aa19.47■□□□□ 0.71
TVP23A-202ENST00000456096 PDCD2LQ9BRP1 358 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms