RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CSADQ9Y600 493 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 CHUKO15111 745 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 SERPING1P05155 500 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 PTPREP23469 700 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 BTDP43251 543 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 SESN3P58005 492 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
SEC16A-207ENST00000453963 OTUD6AQ7L8S5 288 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 KIF2CQ99661 725 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 PCDHB6Q9Y5E3 794 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 XDHP47989 1333 aa13.11□□□□□ -0.31
SEC16A-207ENST00000453963 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 C1orf112Q9NSG2 853 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 NOVA2Q9UNW9 492 aaKnown RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 GYS2P54840 703 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 DCAF15Q66K64 600 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 CCHCR1Q8TD31 782 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 NSMCE1Q8WV22 266 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 SMIM24O75264 130 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 FTCDO95954 541 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 KRT19P08727 400 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 P4HA1P13674 534 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 MIER3Q7Z3K6 550 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 TXLNGQ9NUQ3 528 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 ZNF148Q9UQR1 794 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 CCDC188H7C350 402 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 RFC1P35251 1148 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 KCNJ6P48051 423 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 BFSP1Q12934 665 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-207ENST00000453963 PPM1KQ8N3J5 372 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 HAUS2Q9NVX0 235 aa13.1□□□□□ -0.31
SEC16A-207ENST00000453963 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 PSMD2Q13200 908 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 MESDQ14696 234 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 NDST4Q9H3R1 872 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 MYO1FO00160 1098 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 FOSP01100 380 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 SEPT2Q15019 361 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 GJA10Q969M2 543 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 TUBB6Q9BUF5 446 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 KIAA1024Q9UPX6 916 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 FRMD3A2A2Y4 597 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 BPIFB4P59827 614 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 GNPTABQ3T906 1256 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 FMO2Q99518 471 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 USP27XA6NNY8 438 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 SERPINB2P05120 415 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 GCFC2P16383 781 aaKnown RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 ICA1Q05084 483 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 PPP2R5DQ14738 602 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
SEC16A-207ENST00000453963 GOLPH3LQ9H4A5 285 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 AS3MTQ9HBK9 375 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 ZSWIM5Q9P217 1185 aa13.09□□□□□ -0.31
SEC16A-207ENST00000453963 K7ENM7 598 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 BBOX1O75936 387 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 ECEL1O95672 775 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
SEC16A-207ENST00000453963 ARHGAP4P98171 946 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 LRRC63Q05C16 580 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 NLRP10Q86W26 655 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 HAUS1Q96CS2 278 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 H0YCG3 227 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 RASGRF2O14827 1237 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 PSMC2P35998 433 aaKnown RBP13.08□□□□□ -0.32
SEC16A-207ENST00000453963 C6orf118Q5T5N4 469 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 TRIM42Q8IWZ5 723 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
SEC16A-207ENST00000453963 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 GAP43P17677 238 aa13.08□□□□□ -0.32
SEC16A-207ENST00000453963 SLC7A5Q01650 507 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 515.3 ms