RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 STXBP3O00186 592 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 CPLX1O14810 134 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 NR3C2P08235 984 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 SCG2P13521 617 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 NAPAP54920 295 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 PKN1Q16512 942 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 CPLX2Q6PUV4 134 aaKnown RBP22.93■■□□□ 1.26
COL9A3-202ENST00000452372 RNF180Q86T96 592 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 TEX2Q8IWB9 1127 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 SMARCC2Q8TAQ2 1214 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 LBHD1Q9BQE6 289 aaPredicted RBP22.93■■□□□ 1.26
COL9A3-202ENST00000452372 PDCD2LQ9BRP1 358 aa22.93■■□□□ 1.26
COL9A3-202ENST00000452372 ITGB8P26012 769 aa22.92■■□□□ 1.26
COL9A3-202ENST00000452372 SCRN1Q12765 414 aa22.92■■□□□ 1.26
COL9A3-202ENST00000452372 VSIG10LQ86VR7 867 aa22.92■■□□□ 1.26
COL9A3-202ENST00000452372 DEFB123Q8N688 67 aa22.92■■□□□ 1.26
COL9A3-202ENST00000452372 SLC26A6Q9BXS9 759 aa22.92■■□□□ 1.26
COL9A3-202ENST00000452372 GNEQ9Y223 722 aaKnown RBP22.92■■□□□ 1.26
COL9A3-202ENST00000452372 SYNRGQ9UMZ2 1314 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 A0A1W2PQ45 241 aaPredicted RBP22.91■■□□□ 1.26
COL9A3-202ENST00000452372 A0A1W2PQY0 241 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 MYADML2A6NDP7 307 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 EIF3JO75822 258 aaKnown RBP22.91■■□□□ 1.26
COL9A3-202ENST00000452372 SMPD1P17405 629 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 GJA9P57773 515 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 SSRP1Q08945 709 aaKnown RBP22.91■■□□□ 1.26
COL9A3-202ENST00000452372 PGM5Q15124 567 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 TRIM22Q8IYM9 498 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 BADQ92934 168 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 TSEN34Q9BSV6 310 aaKnown RBP22.91■■□□□ 1.26
COL9A3-202ENST00000452372 WDR11Q9BZH6 1224 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 RIC8AQ9NPQ8 531 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 MTMR10Q9NXD2 777 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 PRKAG2Q9UGJ0 569 aa22.91■■□□□ 1.26
COL9A3-202ENST00000452372 FRMPD4Q14CM0 1322 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 SMCO2A6NFE2 343 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 PPFIA3O75145 1194 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 ACLYP53396 1101 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 ME3Q16798 604 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 DUSP28Q4G0W2 176 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 SCFD2Q8WU76 684 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 BACH2Q9BYV9 841 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 GLT8D2Q9H1C3 349 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 UPF3AQ9H1J1 476 aaKnown RBP22.9■■□□□ 1.26
COL9A3-202ENST00000452372 SPC25Q9HBM1 224 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 Q9Y3F1 56 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 KIAA1217Q5T5P2 1943 aa22.9■■□□□ 1.26
COL9A3-202ENST00000452372 MYCLP12524 364 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-202ENST00000452372 NKX3-2P78367 333 aa22.89■■□□□ 1.25
COL9A3-202ENST00000452372 SHHQ15465 462 aa22.89■■□□□ 1.25
COL9A3-202ENST00000452372 KCNA10Q16322 511 aa22.89■■□□□ 1.25
COL9A3-202ENST00000452372 UBE2SQ16763 222 aa22.89■■□□□ 1.25
COL9A3-202ENST00000452372 TMEM63BQ5T3F8 832 aa22.89■■□□□ 1.25
COL9A3-202ENST00000452372 NOL8Q76FK4 1167 aaKnown RBP22.89■■□□□ 1.25
COL9A3-202ENST00000452372 PRDM5Q9NQX1 630 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-202ENST00000452372 ESYT2A0FGR8 921 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 CTAGE5O15320 804 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 CDKL5O76039 1030 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 CCND2P30279 289 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 ADCY7P51828 1080 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 TTLL4Q14679 1199 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 C9orf50Q5SZB4 431 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 SEPT14Q6ZU15 432 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 IL31RAQ8NI17 732 aa22.88■■□□□ 1.25
COL9A3-202ENST00000452372 CCDC12Q8WUD4 166 aaPredicted RBP22.88■■□□□ 1.25
COL9A3-202ENST00000452372 SPDYE3A6NKU9 549 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 NKRFO15226 690 aaKnown RBP eCLIP22.87■■□□□ 1.25
COL9A3-202ENST00000452372 DYNC1LI2O43237 492 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-202ENST00000452372 DEXIO95424 95 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 LARGE1O95461 756 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 C6orf222P0C671 652 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-202ENST00000452372 CST5P28325 142 aaPredicted RBP22.87■■□□□ 1.25
COL9A3-202ENST00000452372 RABEP1Q15276 862 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 CCDC62Q6P9F0 684 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 GTF3C6Q969F1 213 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 TBC1D32Q96NH3 1257 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 ZMYND12Q9H0C1 365 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 AP5M1Q9H0R1 490 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 LIMCH1Q9UPQ0 1083 aa22.87■■□□□ 1.25
COL9A3-202ENST00000452372 KIAA0355O15063 1070 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 TXNP10599 105 aaKnown RBP22.86■■□□□ 1.25
COL9A3-202ENST00000452372 FAAP100Q0VG06 881 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 XRRA1Q6P2D8 792 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 ANKRD33Q7Z3H0 272 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 TLK2Q86UE8 772 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 NECAB1Q8N987 351 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 IL27Q8NEV9 243 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 C6orf50Q9HD87 102 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 SH3GLB2Q9NR46 395 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 PCDHA6Q9UN73 950 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 PCDHA8Q9Y5H6 950 aa22.86■■□□□ 1.25
COL9A3-202ENST00000452372 MOXD2PA6NHM9 499 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 STAM2O75886 525 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 RGS20O76081 388 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 ARIH2O95376 493 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 CTDNEP1O95476 244 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 FOSP01100 380 aaPredicted RBP22.85■■□□□ 1.25
COL9A3-202ENST00000452372 CLTBP09497 229 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 PTGS1P23219 599 aa22.85■■□□□ 1.25
COL9A3-202ENST00000452372 CLK2P49760 499 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms