RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CWC27Q6UX04 472 aaKnown RBP12.72□□□□□ -0.37
USP1-204ENST00000452143 DEFB128Q7Z7B8 93 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 PLEKHM2Q8IWE5 1019 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 RETREG2Q8NC44 543 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 COPS5Q92905 334 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
USP1-204ENST00000452143 MYH7BA7E2Y1 1941 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 PARNO95453 639 aaKnown RBP12.71□□□□□ -0.37
USP1-204ENST00000452143 CA3P07451 260 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.37
USP1-204ENST00000452143 NUCB1Q02818 461 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 RBL2Q08999 1139 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 STXBP2Q15833 593 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
USP1-204ENST00000452143 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
USP1-204ENST00000452143 AFAP1L1Q8TED9 768 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.37
USP1-204ENST00000452143 RMDN3Q96TC7 470 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 KRT23Q9C075 422 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 CPVLQ9H3G5 476 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
USP1-204ENST00000452143 MRPL11Q9Y3B7 192 aaKnown RBP12.71□□□□□ -0.37
USP1-204ENST00000452143 B4E1Z4 1266 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
USP1-204ENST00000452143 MYOGP15173 224 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
USP1-204ENST00000452143 GHRHRQ02643 423 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 ARHGAP1Q07960 439 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 PTGISQ16647 500 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 B4GALNT3Q6L9W6 998 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 ADAMTS19Q8TE59 1207 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 AFG1LQ8WV93 481 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
USP1-204ENST00000452143 COL20A1Q9P218 1284 aa12.7□□□□□ -0.38
USP1-204ENST00000452143 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
USP1-204ENST00000452143 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
USP1-204ENST00000452143 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
USP1-204ENST00000452143 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
USP1-204ENST00000452143 CCDC85BQ15834 202 aaPredicted RBP12.69□□□□□ -0.38
USP1-204ENST00000452143 DGKDQ16760 1214 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 LY6KQ17RY6 165 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 AAK1Q2M2I8 961 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 ARHGEF16Q5VV41 709 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 SEPT14Q6ZU15 432 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 HERC6Q8IVU3 1022 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 TAAR1Q96RJ0 339 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 AMNQ9BXJ7 453 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.381e-8■□□□□ 10.2
USP1-204ENST00000452143 ZSWIM5Q9P217 1185 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 GTF2IRD1Q9UHL9 959 aa12.69□□□□□ -0.38
USP1-204ENST00000452143 SIP14410 1827 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 F2P00734 622 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 SELPP16109 830 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
USP1-204ENST00000452143 KCNJ6P48051 423 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 HSD17B4P51659 736 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
USP1-204ENST00000452143 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 LRRC8DQ7L1W4 858 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 PPTC7Q8NI37 304 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 TBC1D5Q92609 795 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 KAT2BQ92831 832 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 UHRF1Q96T88 793 aaPredicted RBP12.68□□□□□ -0.38
USP1-204ENST00000452143 JMJD4Q9H9V9 463 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
USP1-204ENST00000452143 MRVI1Q9Y6F6 885 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
USP1-204ENST00000452143 CFBP00751 764 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 NR3C2P08235 984 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 HOXD8P13378 290 aaPredicted RBP12.67□□□□□ -0.38
USP1-204ENST00000452143 CHMP4BP1P59074 171 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 TRAF1Q13077 416 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 GDF6Q6KF10 455 aaPredicted RBP12.67□□□□□ -0.38
USP1-204ENST00000452143 KCNV1Q6PIU1 500 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 CHST3Q7LGC8 479 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 MTMR8Q96EF0 704 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 MTCH2Q9Y6C9 303 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 MICAL3Q7RTP6 2002 aa12.67□□□□□ -0.38
USP1-204ENST00000452143 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 HAS3O00219 553 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 OPLAHO14841 1288 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 ZBTB5O15062 677 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 EFCAB14O75071 495 aa12.66□□□□□ -0.38
USP1-204ENST00000452143 IGHDP01880 384 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms