RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 HSD17B4P51659 736 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 GHRHRQ02643 423 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 PTPN11Q06124 597 aaPredicted RBP11.53□□□□□ -0.56
LINC01238-204ENST00000451070 STXBP2Q15833 593 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 DEFB128Q7Z7B8 93 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 KAT2BQ92831 832 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 IWS1Q96ST2 819 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 GAS2L1Q99501 681 aaPredicted RBP11.53□□□□□ -0.56
LINC01238-204ENST00000451070 SLC28A3Q9HAS3 691 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 MAD2L2Q9UI95 211 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
LINC01238-204ENST00000451070 GTF3C3Q9Y5Q9 886 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 TRANK1O15050 2925 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 MUC3AQ02505 3323 aa11.52□□□□□ -0.56
LINC01238-204ENST00000451070 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
LINC01238-204ENST00000451070 ZBBXA8MT70 800 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 KLRF2D3W0D1 207 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 CFBP00751 764 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 GH1P01241 217 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 NR3C2P08235 984 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 CYP21A2P08686 494 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 ATP2A2P16615 1042 aaKnown RBP11.52□□□□□ -0.57
LINC01238-204ENST00000451070 PTH1RQ03431 593 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 ARHGEF16Q5VV41 709 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 SESTD1Q86VW0 696 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 AMNQ9BXJ7 453 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 SENP2Q9HC62 589 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 PXMP2Q9NR77 195 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
LINC01238-204ENST00000451070 PCDHA11Q9Y5I1 949 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.57
LINC01238-204ENST00000451070 ZBTB5O15062 677 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
LINC01238-204ENST00000451070 RGS20O76081 388 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 CHMLP26374 656 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 RFC2P35250 354 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 GPNMBQ14956 572 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 PTGISQ16647 500 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
LINC01238-204ENST00000451070 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 PPM1EQ8WY54 764 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
LINC01238-204ENST00000451070 PDCD2LQ9BRP1 358 aa11.51□□□□□ -0.57
LINC01238-204ENST00000451070 PRRC2BQ5JSZ5 2229 aaKnown RBP11.51□□□□□ -0.57
LINC01238-204ENST00000451070 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 CYTH3O43739 400 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 HOXD8P13378 290 aaPredicted RBP11.5□□□□□ -0.57
LINC01238-204ENST00000451070 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
LINC01238-204ENST00000451070 IGFBP4P22692 258 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 CHMP4BP1P59074 171 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
LINC01238-204ENST00000451070 BFSP2Q13515 415 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 GRM4Q14833 912 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 IL31RAQ8NI17 732 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 DHX38Q92620 1227 aaKnown RBP11.5□□□□□ -0.57
LINC01238-204ENST00000451070 RIOX1Q9H6W3 641 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 MRVI1Q9Y6F6 885 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 NCOR1O75376 2440 aa11.5□□□□□ -0.57
LINC01238-204ENST00000451070 DOCK5Q9H7D0 1870 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 E7EWF7 191 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 HAS3O00219 553 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 ARHGEF15O94989 841 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 F2P00734 622 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 ACTN1P12814 892 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 HOXA13P31271 388 aaPredicted RBP11.49□□□□□ -0.57
LINC01238-204ENST00000451070 PSEN2P49810 448 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 SP2Q02086 613 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 RBL2Q08999 1139 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 TROAPQ12815 778 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 TRDNQ13061 729 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 PGM5Q15124 567 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
LINC01238-204ENST00000451070 DGKDQ16760 1214 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 TMEM67Q5HYA8 995 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 VSIG10LQ86VR7 867 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 HOMER1Q86YM7 354 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 AFAP1L1Q8TED9 768 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 SYMPKQ92797 1274 aaKnown RBP11.49□□□□□ -0.57
LINC01238-204ENST00000451070 PIGSQ96S52 555 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 SLC9A7Q96T83 725 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 MAP3K20Q9NYL2 800 aaKnown RBP11.49□□□□□ -0.57
LINC01238-204ENST00000451070 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 NOD1Q9Y239 953 aa11.49□□□□□ -0.57
LINC01238-204ENST00000451070 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
LINC01238-204ENST00000451070 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
LINC01238-204ENST00000451070 IFIT3O14879 490 aaKnown RBP11.48□□□□□ -0.57
LINC01238-204ENST00000451070 SGSM2O43147 1006 aa11.48□□□□□ -0.57
LINC01238-204ENST00000451070 CA3P07451 260 aa11.48□□□□□ -0.57
LINC01238-204ENST00000451070 ZNF286BP0CG31 522 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms