RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TMEM63BQ5T3F8 832 aa18.53■□□□□ 0.56
SGCE-208ENST00000450385 SEPT14Q6ZU15 432 aa18.53■□□□□ 0.56
SGCE-208ENST00000450385 RNPC3Q96LT9 517 aaKnown RBP18.53■□□□□ 0.56
SGCE-208ENST00000450385 STXBP5LQ9Y2K9 1186 aa18.53■□□□□ 0.56
SGCE-208ENST00000450385 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.52■□□□□ 0.56
SGCE-208ENST00000450385 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.52■□□□□ 0.56
SGCE-208ENST00000450385 EPB41L2O43491 1005 aaKnown RBP18.52■□□□□ 0.56
SGCE-208ENST00000450385 PPFIA4O75335 1185 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 PFKMP08237 780 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 MYL3P08590 195 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 EIF2AK2P19525 551 aaKnown RBP18.52■□□□□ 0.56
SGCE-208ENST00000450385 RCAN1P53805 252 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 DHX32Q7L7V1 743 aaKnown RBP18.52■□□□□ 0.56
SGCE-208ENST00000450385 SESTD1Q86VW0 696 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 PPTC7Q8NI37 304 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 CUL5Q93034 780 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 NEK1Q96PY6 1258 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 KATNAL1Q9BW62 490 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 IL23AQ9NPF7 189 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 MRVI1Q9Y6F6 885 aa18.52■□□□□ 0.56
SGCE-208ENST00000450385 FRMPD4Q14CM0 1322 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 B4GALT4O60513 344 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 ARIH2O95376 493 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 ARHGAP1Q07960 439 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 PGM5Q15124 567 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 LY6KQ17RY6 165 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 SLC35G1Q2M3R5 365 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 NBPF20Q3BBV1 942 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 ZNF697Q5TEC3 545 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
SGCE-208ENST00000450385 NOC4LQ9BVI4 516 aaKnown RBP18.51■□□□□ 0.55
SGCE-208ENST00000450385 RBM28Q9NW13 759 aaKnown RBP18.51■□□□□ 0.55
SGCE-208ENST00000450385 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
SGCE-208ENST00000450385 RFC2P35250 354 aa18.5■□□□□ 0.55
SGCE-208ENST00000450385 TMEM240Q5SV17 173 aa18.5■□□□□ 0.55
SGCE-208ENST00000450385 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
SGCE-208ENST00000450385 DHX37Q8IY37 1157 aaKnown RBP18.5■□□□□ 0.55
SGCE-208ENST00000450385 AFG1LQ8WV93 481 aa18.5■□□□□ 0.55
SGCE-208ENST00000450385 PARNO95453 639 aaKnown RBP18.49■□□□□ 0.55
SGCE-208ENST00000450385 MMP3P08254 477 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 HOXD8P13378 290 aaPredicted RBP18.49■□□□□ 0.55
SGCE-208ENST00000450385 CSF2RAP15509 400 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 ICAM3P32942 547 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 EPHB4P54760 987 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 PSMC6P62333 389 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
SGCE-208ENST00000450385 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 HERVK_113Q902F9 699 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 COPS5Q92905 334 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 KCNB2Q92953 911 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 TRPV6Q9H1D0 765 aa18.49■□□□□ 0.55
SGCE-208ENST00000450385 REC8O95072 547 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 FGBP02675 491 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 NEFLP07196 543 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 MYCLP12524 364 aaPredicted RBP18.48■□□□□ 0.55
SGCE-208ENST00000450385 HOXA13P31271 388 aaPredicted RBP18.48■□□□□ 0.55
SGCE-208ENST00000450385 CYP2C18P33260 490 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 BFSP2Q13515 415 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 CELF3Q5SZQ8 465 aaKnown RBP18.48■□□□□ 0.55
SGCE-208ENST00000450385 MYSM1Q5VVJ2 828 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 FBXL16Q8N461 479 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
SGCE-208ENST00000450385 CCDC155Q8N6L0 562 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 GIMAP8Q8ND71 665 aaPredicted RBP18.48■□□□□ 0.55
SGCE-208ENST00000450385 SENP7Q9BQF6 1050 aa18.48■□□□□ 0.55
SGCE-208ENST00000450385 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.48■□□□□ 0.55
SGCE-208ENST00000450385 PTGS1P23219 599 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 NEDD9Q14511 834 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 C16orf59Q7L2K0 433 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 RETREG2Q8NC44 543 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 SMARCC2Q8TAQ2 1214 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 CDHR1Q96JP9 859 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 INPP4AQ96PE3 977 aaPredicted RBP18.47■□□□□ 0.55
SGCE-208ENST00000450385 PPP1R12CQ9BZL4 782 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 GLT8D2Q9H1C3 349 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 PSTPIP2Q9H939 334 aa18.47■□□□□ 0.55
SGCE-208ENST00000450385 CCDC196A0A1B0GTZ2 297 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 hCG_1984214I3L0E3 225 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 MAFGO15525 162 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 RGS20O76081 388 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 PCNX4Q63HM2 1172 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 APOA5Q6Q788 366 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 TMTC3Q6ZXV5 915 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 ZNF365Q70YC5 407 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 ZNF713Q8N859 430 aaPredicted RBP18.46■□□□□ 0.55
SGCE-208ENST00000450385 MYL10Q9BUA6 226 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 SEMA6BQ9H3T3 888 aa18.46■□□□□ 0.55
SGCE-208ENST00000450385 TRIP12Q14669 1992 aaPredicted RBP18.46■□□□□ 0.55
SGCE-208ENST00000450385 SPATA31C2B4DYI2 1134 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 MEIS2O14770 477 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 ZBTB43O43298 467 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 FIBPO43427 364 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 F2P00734 622 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 Q7L0L9 218 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
SGCE-208ENST00000450385 EHMT1Q9H9B1 1298 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms