RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 KAT2BQ92831 832 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 IL23AQ9NPF7 189 aa14.33□□□□□ -0.12
MSH5-209ENST00000450148 TRMT13Q9NUP7 481 aaKnown RBP14.33□□□□□ -0.12
MSH5-209ENST00000450148 PLEKHA8P1O95397 391 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 ZNF697Q5TEC3 545 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 NFRKBQ6P4R8 1299 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 CASC1Q6TDU7 716 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 SRBD1Q8N5C6 995 aaKnown RBP14.32□□□□□ -0.12
MSH5-209ENST00000450148 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
MSH5-209ENST00000450148 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 SEMA6BQ9H3T3 888 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
MSH5-209ENST00000450148 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 GCOM1H8Y6P7 765 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 POLR2MP0CAP2 368 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 CYP2C9P11712 490 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 MYCLP12524 364 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 RXRAP19793 462 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 CCL23P55773 120 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 PTPN11Q06124 597 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 TRAF1Q13077 416 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 PSRC1Q6PGN9 363 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 SGMS1Q86VZ5 419 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 TMTC2Q8N394 836 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
MSH5-209ENST00000450148 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.12
MSH5-209ENST00000450148 CTAGE1Q96RT6 745 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
MSH5-209ENST00000450148 SUPT20HL2P0C7V6 817 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 HOXD8P13378 290 aaPredicted RBP14.3□□□□□ -0.12
MSH5-209ENST00000450148 KIF5BP33176 963 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
MSH5-209ENST00000450148 EXOSC10Q01780 885 aaKnown RBP14.3□□□□□ -0.12
MSH5-209ENST00000450148 SP2Q02086 613 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 ADCK5Q3MIX3 580 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 FCHSD1Q86WN1 690 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
MSH5-209ENST00000450148 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 SCLYQ96I15 445 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
MSH5-209ENST00000450148 CXXC1Q9P0U4 656 aaPredicted RBP14.3□□□□□ -0.12
MSH5-209ENST00000450148 MRVI1Q9Y6F6 885 aa14.3□□□□□ -0.12
MSH5-209ENST00000450148 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 MYO9BQ13459 2157 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 HAS3O00219 553 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 MEIS2O14770 477 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 CDC45O75419 566 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 GNAQP50148 359 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 FAM47CQ5HY64 1035 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 PPTC7Q8NI37 304 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 RRP36Q96EU6 259 aaKnown RBP14.29□□□□□ -0.12
MSH5-209ENST00000450148 CDX2Q99626 313 aaPredicted RBP14.29□□□□□ -0.12
MSH5-209ENST00000450148 LZTS2Q9BRK4 669 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 LAMA2P24043 3122 aaKnown RBP14.29□□□□□ -0.12
MSH5-209ENST00000450148 COL6A3P12111 3177 aa14.29□□□□□ -0.12
MSH5-209ENST00000450148 PIK3CDO00329 1044 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 FGBP02675 491 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 CALM1P0DP23 149 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 CALM2P0DP24 149 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 CALM3P0DP25 149 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 TGFB3P10600 412 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 CASTP20810 708 aaKnown RBP14.28□□□□□ -0.12
MSH5-209ENST00000450148 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
MSH5-209ENST00000450148 DNAJB2P25686 324 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 CCND2P30279 289 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 PBX2P40425 430 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 SEMA3FQ13275 785 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 LAMC2Q13753 1193 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 DGKDQ16760 1214 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
MSH5-209ENST00000450148 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 NFXL1Q6ZNB6 911 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 TMTC3Q6ZXV5 915 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 KCNB2Q92953 911 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 INPP4AQ96PE3 977 aaPredicted RBP14.28□□□□□ -0.12
MSH5-209ENST00000450148 NEK1Q96PY6 1258 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 PBX4Q9BYU1 374 aa14.28□□□□□ -0.12
MSH5-209ENST00000450148 GGPS1O95749 300 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 F2P00734 622 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 ICAM3P32942 547 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 RNF20Q5VTR2 975 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.13
MSH5-209ENST00000450148 APOA5Q6Q788 366 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 DHX37Q8IY37 1157 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms