RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.421e-6■□□□□ 9.2
CHD3-205ENST00000449744 LRRC2Q9BYS8 371 aa17.66■□□□□ 0.42
CHD3-205ENST00000449744 DDX41Q9UJV9 622 aaKnown RBP17.66■□□□□ 0.42
CHD3-205ENST00000449744 BAZ2BQ9UIF8 2168 aaKnown RBP17.66■□□□□ 0.42
CHD3-205ENST00000449744 MMP3P08254 477 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 RXRAP19793 462 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 CCND2P30279 289 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 PGM5Q15124 567 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 PSRC1Q6PGN9 363 aaPredicted RBP17.65■□□□□ 0.42
CHD3-205ENST00000449744 KCNV1Q6PIU1 500 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 TRMT13Q9NUP7 481 aaKnown RBP17.65■□□□□ 0.42
CHD3-205ENST00000449744 STXBP5LQ9Y2K9 1186 aa17.65■□□□□ 0.42
CHD3-205ENST00000449744 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.64■□□□□ 0.41
CHD3-205ENST00000449744 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.64■□□□□ 0.41
CHD3-205ENST00000449744 NEFLP07196 543 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 ACRP10323 421 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
CHD3-205ENST00000449744 CCL23P55773 120 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
CHD3-205ENST00000449744 LAMC2Q13753 1193 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 TMEM240Q5SV17 173 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 NFRKBQ6P4R8 1299 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 VSIG10LQ86VR7 867 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 DHX37Q8IY37 1157 aaKnown RBP17.64■□□□□ 0.41
CHD3-205ENST00000449744 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 CUL5Q93034 780 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 FAM161BQ96MY7 647 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 NOC4LQ9BVI4 516 aaKnown RBP17.64■□□□□ 0.41
CHD3-205ENST00000449744 IL23AQ9NPF7 189 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 NOD1Q9Y239 953 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 UMODL1Q5DID0 1318 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 KIAA1217Q5T5P2 1943 aa17.64■□□□□ 0.41
CHD3-205ENST00000449744 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
CHD3-205ENST00000449744 CYP2C9P11712 490 aa17.63■□□□□ 0.41
CHD3-205ENST00000449744 COL9A3Q14050 684 aaPredicted RBP17.63■□□□□ 0.41
CHD3-205ENST00000449744 KRT32Q14532 448 aa17.63■□□□□ 0.41
CHD3-205ENST00000449744 DGKDQ16760 1214 aa17.63■□□□□ 0.41
CHD3-205ENST00000449744 ZNF365Q70YC5 407 aa17.63■□□□□ 0.41
CHD3-205ENST00000449744 CMTR1Q8N1G2 835 aaKnown RBP17.63■□□□□ 0.41
CHD3-205ENST00000449744 SRBD1Q8N5C6 995 aaKnown RBP17.63■□□□□ 0.41
CHD3-205ENST00000449744 MTIF3Q9H2K0 278 aaKnown RBP17.63■□□□□ 0.41
CHD3-205ENST00000449744 C16orf59Q7L2K0 433 aa17.62■□□□□ 0.41
CHD3-205ENST00000449744 DHX32Q7L7V1 743 aaKnown RBP17.62■□□□□ 0.41
CHD3-205ENST00000449744 SGMS1Q86VZ5 419 aa17.62■□□□□ 0.41
CHD3-205ENST00000449744 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
CHD3-205ENST00000449744 RPUSD2Q8IZ73 545 aaKnown RBP17.62■□□□□ 0.41
CHD3-205ENST00000449744 FANCBQ8NB91 859 aa17.62■□□□□ 0.41
CHD3-205ENST00000449744 IL31RAQ8NI17 732 aa17.62■□□□□ 0.41
CHD3-205ENST00000449744 PPP1R13LQ8WUF5 828 aa17.62■□□□□ 0.41
CHD3-205ENST00000449744 EMID1Q96A84 441 aaPredicted RBP17.62■□□□□ 0.41
CHD3-205ENST00000449744 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
CHD3-205ENST00000449744 SCN10AQ9Y5Y9 1956 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 RGS20O76081 388 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 FGBP02675 491 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 TGFB3P10600 412 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 GNPTABQ3T906 1256 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 CCDC82Q8N4S0 544 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 PPTC7Q8NI37 304 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 WNT8AQ9H1J5 351 aa17.61■□□□□ 0.41
CHD3-205ENST00000449744 SORBS3O60504 671 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 STAM2O75886 525 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 GGPS1O95749 300 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 FGD1P98174 961 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 CELF3Q5SZQ8 465 aaKnown RBP17.6■□□□□ 0.41
CHD3-205ENST00000449744 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 RASEFQ8IZ41 740 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 SCLYQ96I15 445 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 SPATA33Q96N06 139 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 MLXIPQ9HAP2 919 aa17.6■□□□□ 0.41
CHD3-205ENST00000449744 RBM28Q9NW13 759 aaKnown RBP17.6■□□□□ 0.41
CHD3-205ENST00000449744 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 PIK3CDO00329 1044 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 ZBTB43O43298 467 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
CHD3-205ENST00000449744 PSEN2P49810 448 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
CHD3-205ENST00000449744 BFSP2Q13515 415 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 PTGISQ16647 500 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 APOA5Q6Q788 366 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 HERVK_113Q902F9 699 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 KAT2BQ92831 832 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 GUCD1Q96NT3 240 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 ALG1Q9BT22 464 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 RTEL1Q9NZ71 1219 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 COL6A3P12111 3177 aa17.59■□□□□ 0.41
CHD3-205ENST00000449744 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.4
CHD3-205ENST00000449744 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms