RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 ATP2B1P20020 1258 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 NBR1Q14596 966 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 PCNX4Q63HM2 1172 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 UIMC1Q96RL1 719 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 IWS1Q96ST2 819 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 PDGFCQ9NRA1 345 aa13.52□□□□□ -0.25
RCL1-208ENST00000448872 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 FAM86B1E9PN63 330 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 TDP2O95551 362 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 FAM86B2P0C5J1 330 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
RCL1-208ENST00000448872 ITGB5P18084 799 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 PTGS1P23219 599 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 CCND2P30279 289 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
RCL1-208ENST00000448872 PRMT2P55345 433 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 LETM2Q2VYF4 491 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 TRPV1Q8NER1 839 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 KATNBL1Q9H079 304 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
RCL1-208ENST00000448872 BRD1O95696 1058 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 INHAP05111 366 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 GRK4P32298 578 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 CACNB2Q08289 660 aaPredicted RBP13.5□□□□□ -0.25
RCL1-208ENST00000448872 STXBP2Q15833 593 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
RCL1-208ENST00000448872 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
RCL1-208ENST00000448872 SEPT14Q6ZU15 432 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 ZHX1Q9UKY1 873 aaPredicted RBP13.5□□□□□ -0.25
RCL1-208ENST00000448872 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
RCL1-208ENST00000448872 EIF3JO75822 258 aaKnown RBP13.49□□□□□ -0.25
RCL1-208ENST00000448872 F13A1P00488 732 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 MYCP01106 439 aaPredicted RBP13.49□□□□□ -0.25
RCL1-208ENST00000448872 HMGCRP04035 888 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 CYP3A4P08684 503 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 ZNF865P0CJ78 1059 aaPredicted RBP13.49□□□□□ -0.25
RCL1-208ENST00000448872 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
RCL1-208ENST00000448872 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 MFSD14CQ5VZR4 134 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 TAPT1Q6NXT6 567 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
RCL1-208ENST00000448872 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 UBIAD1Q9Y5Z9 338 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 ZNF236Q9UL36 1845 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 PLXNB2O15031 1838 aa13.49□□□□□ -0.25
RCL1-208ENST00000448872 IGLV3-22A0A075B6J6 115 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 SLC37A4O43826 429 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 SORBS3O60504 671 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 CCNT1O60563 726 aaKnown RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 ARIH2O95376 493 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 ARP10275 920 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 CCND3P30281 292 aaPredicted RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 CIITAP33076 1130 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 ZNF76P36508 570 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 ADCYAP1R1P41586 468 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 USP11P51784 963 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 SEMA3FQ13275 785 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 CEP55Q53EZ4 464 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 PRR16Q569H4 304 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 GJA10Q969M2 543 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 LENG9Q96B70 501 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 LENG1Q96BZ8 264 aaPredicted RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 FTOQ9C0B1 505 aaKnown RBP eCLIP13.48□□□□□ -0.25
RCL1-208ENST00000448872 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 B4DLN1 442 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 ADCY6O43306 1168 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 CYBAP13498 195 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 MCM7P33993 719 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 SP2Q02086 613 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 ZNF174Q15697 407 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 TTC38Q5R3I4 469 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 MYSM1Q5VVJ2 828 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 XRRA1Q6P2D8 792 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 FBXO46Q6PJ61 603 aaPredicted RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 BRAPQ7Z569 592 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 VTA1Q9NP79 307 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 JADE2Q9NQC1 790 aa13.48□□□□□ -0.25
RCL1-208ENST00000448872 DDX25Q9UHL0 483 aaKnown RBP13.48□□□□□ -0.25
RCL1-208ENST00000448872 CYP3A7-CYP3A51PA0A087WV96 503 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms