RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 VWA5AO00534 786 aa16.67■□□□□ 0.26
CDK3-202ENST00000448471 TIMP1P01033 207 aa16.67■□□□□ 0.26
CDK3-202ENST00000448471 COPB2P35606 906 aa16.67■□□□□ 0.26
CDK3-202ENST00000448471 MRE11P49959 708 aa16.67■□□□□ 0.26
CDK3-202ENST00000448471 PGBD1Q96JS3 809 aa16.67■□□□□ 0.26
CDK3-202ENST00000448471 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDK3-202ENST00000448471 ZNF214Q9UL59 606 aaPredicted RBP16.67■□□□□ 0.26
CDK3-202ENST00000448471 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
CDK3-202ENST00000448471 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
CDK3-202ENST00000448471 SMCHD1A6NHR9 2005 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
CDK3-202ENST00000448471 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
CDK3-202ENST00000448471 GAS2L3Q86XJ1 694 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 LINC00301Q8NCQ3 95 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 KLHDC9Q8NEP7 349 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
CDK3-202ENST00000448471 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 TBX21Q9UL17 535 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 FAM184BQ9ULE4 1060 aa16.66■□□□□ 0.26
CDK3-202ENST00000448471 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
CDK3-202ENST00000448471 ZNFX1Q9P2E3 1918 aaKnown RBP16.65■□□□□ 0.26
CDK3-202ENST00000448471 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
CDK3-202ENST00000448471 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■■□ 19.7
CDK3-202ENST00000448471 KCNA10Q16322 511 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 MFSD5Q6N075 450 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 LRSAM1Q6UWE0 723 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
CDK3-202ENST00000448471 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
CDK3-202ENST00000448471 REPS2Q8NFH8 660 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
CDK3-202ENST00000448471 MYH6P13533 1939 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
CDK3-202ENST00000448471 RAD21O60216 631 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 PBX2P40425 430 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
CDK3-202ENST00000448471 TMEM240Q5SV17 173 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 CCSAPQ6IQ19 270 aaPredicted RBP16.64■□□□□ 0.25
CDK3-202ENST00000448471 CCDC174Q6PII3 467 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 MSL3Q8N5Y2 521 aaKnown RBP16.64■□□□□ 0.25
CDK3-202ENST00000448471 GLT1D1Q96MS3 346 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 PHF20Q9BVI0 1012 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 PBX4Q9BYU1 374 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 MYH8P13535 1937 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 TTC28Q96AY4 2481 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 MROH7Q68CQ1 1323 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 SYNGAP1Q96PV0 1343 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 SYCE3A1L190 88 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 MYADML2A6NDP7 307 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 GRXCR1A8MXD5 290 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 SCG2P13521 617 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
CDK3-202ENST00000448471 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 ATXN2LQ8WWM7 1075 aaKnown RBP16.64■□□□□ 0.25
CDK3-202ENST00000448471 FTOQ9C0B1 505 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK3-202ENST00000448471 PRDM12Q9H4Q4 367 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 GOPCQ9HD26 462 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
CDK3-202ENST00000448471 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
CDK3-202ENST00000448471 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 BTBD18B2RXH4 712 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 SNAI1O95863 264 aaPredicted RBP16.63■□□□□ 0.25
CDK3-202ENST00000448471 CSF2RAP15509 400 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 CST5P28325 142 aaPredicted RBP16.63■□□□□ 0.25
CDK3-202ENST00000448471 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
CDK3-202ENST00000448471 STK38Q15208 465 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 RASIP1Q5U651 963 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 SH3GLB2Q9NR46 395 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 THEGQ9P2T0 379 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 CLIC4Q9Y696 253 aa16.63■□□□□ 0.25
CDK3-202ENST00000448471 SPTLC2O15270 562 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
CDK3-202ENST00000448471 TTLL1O95922 423 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 ASGR1P07306 291 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
CDK3-202ENST00000448471 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
CDK3-202ENST00000448471 LIG1P18858 919 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 CDK7P50613 346 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 ADALQ6DHV7 355 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
CDK3-202ENST00000448471 MAMDC4Q6UXC1 1216 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 BICD2Q8TD16 824 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 BRMS1Q9HCU9 246 aa16.62■□□□□ 0.25
CDK3-202ENST00000448471 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms