RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 COL6A3P12111 3177 aa20.48■□□□□ 0.87
DDX56-207ENST00000448192 LIFRP42702 1097 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 SMAD3P84022 425 aaKnown RBP20.47■□□□□ 0.87
DDX56-207ENST00000448192 PGM5Q15124 567 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 ZNF697Q5TEC3 545 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 FAM109BQ6ICB4 259 aaPredicted RBP20.47■□□□□ 0.87
DDX56-207ENST00000448192 C16orf59Q7L2K0 433 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 RAB11FIP4Q86YS3 637 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 LZTS2Q9BRK4 669 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 NOC4LQ9BVI4 516 aaKnown RBP20.47■□□□□ 0.87
DDX56-207ENST00000448192 SEC63Q9UGP8 760 aaKnown RBP20.47■□□□□ 0.87
DDX56-207ENST00000448192 SLC12A7Q9Y666 1083 aa20.47■□□□□ 0.87
DDX56-207ENST00000448192 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 MMP3P08254 477 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 SUPT20HL2P0C7V6 817 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CALM1P0DP23 149 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CALM2P0DP24 149 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CALM3P0DP25 149 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CCND2P30279 289 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 GNAQP50148 359 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CCL23P55773 120 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 TMEM240Q5SV17 173 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
DDX56-207ENST00000448192 IL31RAQ8NI17 732 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 ZFP91Q96JP5 570 aaPredicted RBP20.46■□□□□ 0.87
DDX56-207ENST00000448192 NEK1Q96PY6 1258 aa20.46■□□□□ 0.87
DDX56-207ENST00000448192 CYP2C9P11712 490 aa20.45■□□□□ 0.86
DDX56-207ENST00000448192 SMARCA1P28370 1054 aa20.45■□□□□ 0.86
DDX56-207ENST00000448192 ZNF365Q70YC5 407 aa20.45■□□□□ 0.86
DDX56-207ENST00000448192 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
DDX56-207ENST00000448192 DHX37Q8IY37 1157 aaKnown RBP20.45■□□□□ 0.86
DDX56-207ENST00000448192 SRBD1Q8N5C6 995 aaKnown RBP20.45■□□□□ 0.86
DDX56-207ENST00000448192 IL23AQ9NPF7 189 aa20.45■□□□□ 0.86
DDX56-207ENST00000448192 SORBS3O60504 671 aa20.44■□□□□ 0.86
DDX56-207ENST00000448192 RGS20O76081 388 aa20.44■□□□□ 0.86
DDX56-207ENST00000448192 CASTP20810 708 aaKnown RBP20.44■□□□□ 0.86
DDX56-207ENST00000448192 LAMC2Q13753 1193 aa20.44■□□□□ 0.86
DDX56-207ENST00000448192 NFRKBQ6P4R8 1299 aa20.44■□□□□ 0.86
DDX56-207ENST00000448192 PSRC1Q6PGN9 363 aaPredicted RBP20.44■□□□□ 0.86
DDX56-207ENST00000448192 SYNE3Q6ZMZ3 975 aa20.44■□□□□ 0.86
DDX56-207ENST00000448192 CCDC82Q8N4S0 544 aa20.44■□□□□ 0.86
DDX56-207ENST00000448192 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.43■□□□□ 0.86
DDX56-207ENST00000448192 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.43■□□□□ 0.86
DDX56-207ENST00000448192 DGKDQ16760 1214 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 KCNV1Q6PIU1 500 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 RASEFQ8IZ41 740 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 FANCBQ8NB91 859 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 CUL5Q93034 780 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 EMID1Q96A84 441 aaPredicted RBP20.43■□□□□ 0.86
DDX56-207ENST00000448192 SCLYQ96I15 445 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 TCEANC2Q96MN5 208 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 WNT8AQ9H1J5 351 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 STXBP5LQ9Y2K9 1186 aa20.43■□□□□ 0.86
DDX56-207ENST00000448192 hCG_1642624A0A1W2PR95 340 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 PTPN11Q06124 597 aaPredicted RBP20.42■□□□□ 0.86
DDX56-207ENST00000448192 USP17L6PQ6QN14 398 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 SGMS1Q86VZ5 419 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 GUCD1Q96NT3 240 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 NOD1Q9Y239 953 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 SCN5AQ14524 2016 aa20.42■□□□□ 0.86
DDX56-207ENST00000448192 DOCK5Q9H7D0 1870 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 GGPS1O95749 300 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 FGBP02675 491 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 KRT32Q14532 448 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 ADCK5Q3MIX3 580 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 DHX32Q7L7V1 743 aaKnown RBP20.41■□□□□ 0.86
DDX56-207ENST00000448192 PPTC7Q8NI37 304 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 KAT2BQ92831 832 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 SEMA6BQ9H3T3 888 aa20.41■□□□□ 0.86
DDX56-207ENST00000448192 NEFLP07196 543 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 ZNF286BP0CG31 522 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 TGFB3P10600 412 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 EXOSC10Q01780 885 aaKnown RBP20.4■□□□□ 0.86
DDX56-207ENST00000448192 SP2Q02086 613 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 TSGA10IPQ3SY00 556 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
DDX56-207ENST00000448192 RASIP1Q5U651 963 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 MYSM1Q5VVJ2 828 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 APOA5Q6Q788 366 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 TMTC3Q6ZXV5 915 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 OTOP2Q7RTS6 562 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 RPUSD2Q8IZ73 545 aaKnown RBP20.4■□□□□ 0.86
DDX56-207ENST00000448192 GPKOWQ92917 476 aaPredicted RBP eCLIP20.4■□□□□ 0.86
DDX56-207ENST00000448192 SPATA33Q96N06 139 aa20.4■□□□□ 0.86
DDX56-207ENST00000448192 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
DDX56-207ENST00000448192 TRIP12Q14669 1992 aaPredicted RBP20.39■□□□□ 0.86
DDX56-207ENST00000448192 FRMPD4Q14CM0 1322 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 GRXCR1A8MXD5 290 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 UBA1P22314 1058 aaKnown RBP20.39■□□□□ 0.85
DDX56-207ENST00000448192 PSEN2P49810 448 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 MRPS9P82933 396 aaKnown RBP20.39■□□□□ 0.85
DDX56-207ENST00000448192 PTGISQ16647 500 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 GNPTABQ3T906 1256 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 RETREG2Q8NC44 543 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 HERVK_113Q902F9 699 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 ALG1Q9BT22 464 aa20.39■□□□□ 0.85
DDX56-207ENST00000448192 MTIF3Q9H2K0 278 aaKnown RBP20.39■□□□□ 0.85
DDX56-207ENST00000448192 PSTPIP2Q9H939 334 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms