RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 GLE1Q53GS7 698 aaKnown RBP21.15■□□□□ 0.98
SDCBP-204ENST00000447182 HAUS3Q68CZ6 603 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 NFRKBQ6P4R8 1299 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 PDXDC1Q6P996 788 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 C16orf86Q6ZW13 317 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 RRAGAQ7L523 313 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 ZNF713Q8N859 430 aaPredicted RBP21.15■□□□□ 0.98
SDCBP-204ENST00000447182 RIC8AQ9NPQ8 531 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 TSKSQ9UJT2 592 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 SBF2Q86WG5 1849 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 RBAK-RBAKDNI3L0D1 243 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 LDHCP07864 332 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 TXKP42681 527 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 PDIA5Q14554 519 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 ALS2CLQ60I27 953 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 NBPF5PQ86XG9 351 aaPredicted RBP21.14■□□□□ 0.98
SDCBP-204ENST00000447182 CAVIN3Q969G5 261 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 ZFP91Q96JP5 570 aaPredicted RBP21.14■□□□□ 0.98
SDCBP-204ENST00000447182 SETDB2Q96T68 719 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 EYA3Q99504 573 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 LRRC27Q9C0I9 530 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 RNF14Q9UBS8 474 aa21.14■□□□□ 0.98
SDCBP-204ENST00000447182 CDK5RAP2Q96SN8 1893 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 OPA1O60313 960 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 PAFAH1B1P43034 410 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 CDK8P49336 464 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 DIXDC1Q155Q3 683 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 CALCRLQ16602 461 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 CCDC181Q5TID7 509 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 PROM2Q8N271 834 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 DRC1Q96MC2 740 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 TLR10Q9BXR5 811 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 EFCC1Q9HA90 598 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 NARFQ9UHQ1 456 aa21.14■□□□□ 0.97
SDCBP-204ENST00000447182 KCNQ2O43526 872 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 NOVP48745 357 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 IRAK1P51617 712 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 NNTQ13423 1086 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 TMEM266Q2M3C6 531 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 HGSNATQ68CP4 663 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 USP17L2Q6R6M4 530 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-204ENST00000447182 RAD54LQ92698 747 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 NOX5Q96PH1 765 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 NUCKS1Q9H1E3 243 aaKnown RBP21.13■□□□□ 0.97
SDCBP-204ENST00000447182 BIN2Q9UBW5 565 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-204ENST00000447182 SALL4Q9UJQ4 1053 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 DDX60LQ5H9U9 1706 aaKnown RBP21.13■□□□□ 0.97
SDCBP-204ENST00000447182 SYN2Q92777 582 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-204ENST00000447182 CDK5RAP3Q96JB5 506 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 PIGSQ96S52 555 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 RAB34Q9BZG1 259 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 RIOX1Q9H6W3 641 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 LEMD3Q9Y2U8 911 aa21.13■□□□□ 0.97
SDCBP-204ENST00000447182 CLSTN1O94985 981 aa21.12■□□□□ 0.97
SDCBP-204ENST00000447182 KLHDC7AQ5VTJ3 777 aa21.12■□□□□ 0.97
SDCBP-204ENST00000447182 MAPKAPK5Q8IW41 473 aa21.12■□□□□ 0.97
SDCBP-204ENST00000447182 PPM1EQ8WY54 764 aa21.12■□□□□ 0.97
SDCBP-204ENST00000447182 TSG101Q99816 390 aa21.12■□□□□ 0.97
SDCBP-204ENST00000447182 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
SDCBP-204ENST00000447182 FAM107BQ9H098 131 aa21.12■□□□□ 0.97
SDCBP-204ENST00000447182 GRIK5Q16478 980 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 TMEM119Q4V9L6 283 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 TPTE2Q6XPS3 522 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 DYMQ7RTS9 669 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 EFCAB13Q8IY85 973 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 MTMR8Q96EF0 704 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 SAP30BPQ9UHR5 308 aaKnown RBP21.11■□□□□ 0.97
SDCBP-204ENST00000447182 A6NNZ2 444 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 KCNMA1Q12791 1236 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 TUBB8Q3ZCM7 444 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 CACNA2D4Q7Z3S7 1137 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 CAPS2Q9BXY5 557 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 PLEKHA4Q9H4M7 779 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 CEP72Q9P209 647 aa21.11■□□□□ 0.97
SDCBP-204ENST00000447182 CXCR5P32302 372 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 SLC7A5Q01650 507 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 GFPT1Q06210 699 aaPredicted RBP21.1■□□□□ 0.97
SDCBP-204ENST00000447182 SEPT2Q15019 361 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 CFAP221Q4G0U5 840 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 ZCWPW2Q504Y3 356 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 C8orf74Q6P047 294 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 DDX12PQ92771 950 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 TMEM260Q9NX78 707 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 AHDC1Q5TGY3 1603 aaPredicted RBP21.1■□□□□ 0.97
SDCBP-204ENST00000447182 SPATA31A5Q5VU36 1347 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 SPATA31A7Q8IWB4 1347 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 VGLL3A8MV65 326 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 SLC37A4O43826 429 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 EDIL3O43854 480 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 MATR3P43243 847 aaKnown RBP eCLIP21.1■□□□□ 0.97
SDCBP-204ENST00000447182 NOP2P46087 812 aaKnown RBP21.1■□□□□ 0.97
SDCBP-204ENST00000447182 RASSF7Q02833 373 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 BARGINQ6ZT62 677 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 HINFPQ9BQA5 517 aa21.1■□□□□ 0.97
SDCBP-204ENST00000447182 RBM12Q9NTZ6 932 aaKnown RBP21.1■□□□□ 0.97
SDCBP-204ENST00000447182 GRIN2DO15399 1336 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 EIF3HO15372 352 aaKnown RBP eCLIP21.09■□□□□ 0.97
SDCBP-204ENST00000447182 NCK2O43639 380 aa21.09■□□□□ 0.97
SDCBP-204ENST00000447182 CPP00450 1065 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms