RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 BARHL2Q9NY43 387 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 TPCN1Q9ULQ1 816 aa27.53■■■□□ 2
C9orf3-207ENST00000445181 MOXD2PA6NHM9 499 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 STXBP3O00186 592 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 PIK3CDO00329 1044 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 SCG2P13521 617 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 SMPD1P17405 629 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 CST5P28325 142 aaPredicted RBP27.52■■■□□ 2
C9orf3-207ENST00000445181 NTRK3Q16288 839 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 GNASQ5JWF2 1037 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 TRIM22Q8IYM9 498 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 PCSK9Q8NBP7 692 aaKnown RBP27.52■■■□□ 2
C9orf3-207ENST00000445181 PDCD2LQ9BRP1 358 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 STARD7Q9NQZ5 370 aa27.52■■■□□ 2
C9orf3-207ENST00000445181 MEIS2O14770 477 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 PGM5Q15124 567 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 SEPT14Q6ZU15 432 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 TLK2Q86UE8 772 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 SCFD2Q8WU76 684 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 RNF26Q9BY78 433 aaPredicted RBP27.51■■□□□ 1.99
C9orf3-207ENST00000445181 AP5M1Q9H0R1 490 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 PDLIM7Q9NR12 457 aa27.51■■□□□ 1.99
C9orf3-207ENST00000445181 EIF3JO75822 258 aaKnown RBP27.5■■□□□ 1.99
C9orf3-207ENST00000445181 CCND2P30279 289 aa27.5■■□□□ 1.99
C9orf3-207ENST00000445181 ADCY7P51828 1080 aa27.5■■□□□ 1.99
C9orf3-207ENST00000445181 SSRP1Q08945 709 aaKnown RBP27.5■■□□□ 1.99
C9orf3-207ENST00000445181 UBE2SQ16763 222 aa27.5■■□□□ 1.99
C9orf3-207ENST00000445181 SH3RF1Q7Z6J0 888 aa27.5■■□□□ 1.99
C9orf3-207ENST00000445181 LRCH3Q96II8 777 aa27.5■■□□□ 1.99
C9orf3-207ENST00000445181 GNEQ9Y223 722 aaKnown RBP27.5■■□□□ 1.99
C9orf3-207ENST00000445181 RBM47A0AV96 593 aaKnown RBP27.49■■□□□ 1.99
C9orf3-207ENST00000445181 SMCO2A6NFE2 343 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 DYNC1LI2O43237 492 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-207ENST00000445181 PQBP1O60828 265 aaKnown RBP27.49■■□□□ 1.99
C9orf3-207ENST00000445181 ASGR1P07306 291 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 RBM25P49756 843 aaKnown RBP27.49■■□□□ 1.99
C9orf3-207ENST00000445181 SCRN1Q12765 414 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 TTLL4Q14679 1199 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 DUSP28Q4G0W2 176 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 TYW1BQ6NUM6 668 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 CCDC12Q8WUD4 166 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-207ENST00000445181 GLT1D1Q96MS3 346 aa27.49■■□□□ 1.99
C9orf3-207ENST00000445181 TRIM43BA6NCK2 446 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 SPDYE3A6NKU9 549 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 PFKFB2O60825 505 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 CDKL5O76039 1030 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 TXNP10599 105 aaKnown RBP27.48■■□□□ 1.99
C9orf3-207ENST00000445181 NKX3-2P78367 333 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 PKN1Q16512 942 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 LRIT3Q3SXY7 679 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 TMEM63BQ5T3F8 832 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 VSIG10LQ86VR7 867 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 IL31RAQ8NI17 732 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 VTI1AQ96AJ9 217 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 TRIM43Q96BQ3 446 aaPredicted RBP27.48■■□□□ 1.99
C9orf3-207ENST00000445181 RIC8AQ9NPQ8 531 aa27.48■■□□□ 1.99
C9orf3-207ENST00000445181 ELP1O95163 1332 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 CTAGE5O15320 804 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 CLTBP09497 229 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 PTGS1P23219 599 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 BEX3Q00994 111 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 BADQ92934 168 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 GLT8D2Q9H1C3 349 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 Q9Y3F1 56 aa27.47■■□□□ 1.99
C9orf3-207ENST00000445181 NKRFO15226 690 aaKnown RBP eCLIP27.46■■□□□ 1.99
C9orf3-207ENST00000445181 ANKRD33Q7Z3H0 272 aa27.46■■□□□ 1.99
C9orf3-207ENST00000445181 EHMT1Q9H9B1 1298 aa27.46■■□□□ 1.99
C9orf3-207ENST00000445181 FRMPD4Q14CM0 1322 aa27.45■■□□□ 1.99
C9orf3-207ENST00000445181 DCDC2CA8MYV0 355 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 FSCN1Q16658 493 aaKnown RBP27.45■■□□□ 1.98
C9orf3-207ENST00000445181 OR6J1Q8NGC5 347 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 ZFP91Q96JP5 570 aaPredicted RBP27.45■■□□□ 1.98
C9orf3-207ENST00000445181 TOX2Q96NM4 488 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 KIF2CQ99661 725 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 PCDHA6Q9UN73 950 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 PCDHA8Q9Y5H6 950 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 MRVI1Q9Y6F6 885 aa27.45■■□□□ 1.98
C9orf3-207ENST00000445181 ZEB2O60315 1214 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 ARIH2O95376 493 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 DEXIO95424 95 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 ME3Q16798 604 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 TEX2Q8IWB9 1127 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 NECAB1Q8N987 351 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 CCDC148Q8NFR7 591 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 C6orf50Q9HD87 102 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 TMEM39AQ9NV64 488 aa27.44■■□□□ 1.98
C9orf3-207ENST00000445181 KIAA0355O15063 1070 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 FAAP100Q0VG06 881 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 LY6KQ17RY6 165 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 COPS5Q92905 334 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 VPS54Q9P1Q0 977 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 LTBP2Q14767 1821 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 KIAA1217Q5T5P2 1943 aa27.43■■□□□ 1.98
C9orf3-207ENST00000445181 A0A0U1RQG5 324 aaPredicted RBP27.42■■□□□ 1.98
C9orf3-207ENST00000445181 STAM2O75886 525 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 LARGE1O95461 756 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 FOSP01100 380 aaPredicted RBP27.42■■□□□ 1.98
C9orf3-207ENST00000445181 CDK7P50613 346 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 RABEP1Q15276 862 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 GNPTABQ3T906 1256 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms