RNA–Protein interactions for RNA: ENST00000444523.1

CCDC117-204, Transcript of coiled-coil domain containing 117, humanhuman

TSL 4

Gene CCDC117, Length 463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-204ENST00000444523 RGS20O76081 388 aa28.25■■■□□ 2.11
CCDC117-204ENST00000444523 NR3C2P08235 984 aa28.25■■■□□ 2.11
CCDC117-204ENST00000444523 RABGGTBP53611 331 aa28.25■■■□□ 2.11
CCDC117-204ENST00000444523 ADGRE1Q14246 886 aa28.25■■■□□ 2.11
CCDC117-204ENST00000444523 GRM4Q14833 912 aa28.25■■■□□ 2.11
CCDC117-204ENST00000444523 RPUSD2Q8IZ73 545 aaKnown RBP28.25■■■□□ 2.11
CCDC117-204ENST00000444523 PTPRSQ13332 1948 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 E7EWF7 191 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 ZBTB5O15062 677 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 SGSM2O43147 1006 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 GH1P01241 217 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 MYOGP15173 224 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 ANTXR2P58335 489 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 PTPN11Q06124 597 aaPredicted RBP28.24■■■□□ 2.11
CCDC117-204ENST00000444523 ARHGEF16Q5VV41 709 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 CHST3Q7LGC8 479 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 DEFB128Q7Z7B8 93 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 RIOX1Q9H6W3 641 aa28.24■■■□□ 2.11
CCDC117-204ENST00000444523 EIF3JO75822 258 aaKnown RBP28.23■■■□□ 2.11
CCDC117-204ENST00000444523 TROAPQ12815 778 aa28.23■■■□□ 2.11
CCDC117-204ENST00000444523 RAB30Q15771 203 aa28.23■■■□□ 2.11
CCDC117-204ENST00000444523 BMP2KLQ5H9B9 411 aa28.23■■■□□ 2.11
CCDC117-204ENST00000444523 IL31RAQ8NI17 732 aa28.23■■■□□ 2.11
CCDC117-204ENST00000444523 PIGSQ96S52 555 aa28.23■■■□□ 2.11
CCDC117-204ENST00000444523 MTIF3Q9H2K0 278 aaKnown RBP28.23■■■□□ 2.11
CCDC117-204ENST00000444523 MSRAQ9UJ68 235 aa28.23■■■□□ 2.11
CCDC117-204ENST00000444523 U3KPZ7 1027 aaPredicted RBP28.23■■■□□ 2.11
CCDC117-204ENST00000444523 IQCF3P0C7M6 154 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 GPNMBQ14956 572 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 RUFY2Q8WXA3 655 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 PDCD2LQ9BRP1 358 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 PRDM6Q9NQX0 595 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 PCDHA1Q9Y5I3 950 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 SLC4A7Q9Y6M7 1214 aa28.22■■■□□ 2.11
CCDC117-204ENST00000444523 IFIT3O14879 490 aaKnown RBP28.21■■■□□ 2.11
CCDC117-204ENST00000444523 HOXA13P31271 388 aaPredicted RBP28.21■■■□□ 2.11
CCDC117-204ENST00000444523 COL9A3Q14050 684 aaPredicted RBP28.21■■■□□ 2.11
CCDC117-204ENST00000444523 GDF6Q6KF10 455 aaPredicted RBP28.21■■■□□ 2.11
CCDC117-204ENST00000444523 SESTD1Q86VW0 696 aa28.21■■■□□ 2.11
CCDC117-204ENST00000444523 DHX38Q92620 1227 aaKnown RBP28.21■■■□□ 2.11
CCDC117-204ENST00000444523 EMID1Q96A84 441 aaPredicted RBP28.21■■■□□ 2.11
CCDC117-204ENST00000444523 PITPNM1O00562 1244 aa28.2■■■□□ 2.1
CCDC117-204ENST00000444523 CHMP4BP1P59074 171 aa28.2■■■□□ 2.1
CCDC117-204ENST00000444523 TRDNQ13061 729 aa28.2■■■□□ 2.1
CCDC117-204ENST00000444523 HOMER1Q86YM7 354 aa28.2■■■□□ 2.1
CCDC117-204ENST00000444523 MB21D2Q8IYB1 491 aaPredicted RBP28.2■■■□□ 2.1
CCDC117-204ENST00000444523 IGDCC4Q8TDY8 1250 aa28.2■■■□□ 2.1
CCDC117-204ENST00000444523 MAP4K1Q92918 833 aa28.2■■■□□ 2.1
CCDC117-204ENST00000444523 REV3LO60673 3130 aa28.19■■■□□ 2.1
CCDC117-204ENST00000444523 PFKMP08237 780 aa28.19■■■□□ 2.1
CCDC117-204ENST00000444523 VSIG10LQ86VR7 867 aa28.19■■■□□ 2.1
CCDC117-204ENST00000444523 ZFP91Q96JP5 570 aaPredicted RBP28.19■■■□□ 2.1
CCDC117-204ENST00000444523 TTC28Q96AY4 2481 aa28.18■■■□□ 2.1
CCDC117-204ENST00000444523 ZBBXA8MT70 800 aa28.18■■■□□ 2.1
CCDC117-204ENST00000444523 PGM5Q15124 567 aa28.18■■■□□ 2.1
CCDC117-204ENST00000444523 PTGISQ16647 500 aa28.18■■■□□ 2.1
CCDC117-204ENST00000444523 NCOA7Q8NI08 942 aa28.18■■■□□ 2.1
CCDC117-204ENST00000444523 GPKOWQ92917 476 aaPredicted RBP eCLIP28.18■■■□□ 2.1
CCDC117-204ENST00000444523 MRVI1Q9Y6F6 885 aa28.18■■■□□ 2.1
CCDC117-204ENST00000444523 DOCK5Q9H7D0 1870 aa28.17■■■□□ 2.1
CCDC117-204ENST00000444523 HAS3O00219 553 aa28.17■■■□□ 2.1
CCDC117-204ENST00000444523 MYCLP12524 364 aaPredicted RBP28.17■■■□□ 2.1
CCDC117-204ENST00000444523 HOXD8P13378 290 aaPredicted RBP28.17■■■□□ 2.1
CCDC117-204ENST00000444523 ATP2A2P16615 1042 aaKnown RBP28.17■■■□□ 2.1
CCDC117-204ENST00000444523 CASTP20810 708 aaKnown RBP28.17■■■□□ 2.1
CCDC117-204ENST00000444523 RFC2P35250 354 aa28.17■■■□□ 2.1
CCDC117-204ENST00000444523 SP2Q02086 613 aa28.17■■■□□ 2.1
CCDC117-204ENST00000444523 WTAPQ15007 396 aa28.17■■■□□ 2.1
CCDC117-204ENST00000444523 MAP3K20Q9NYL2 800 aaKnown RBP28.17■■■□□ 2.1
CCDC117-204ENST00000444523 PCDHA11Q9Y5I1 949 aa28.17■■■□□ 2.1
CCDC117-204ENST00000444523 PSEN2P49810 448 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 HIC1Q14526 733 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 MYSM1Q5VVJ2 828 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 GAS2L1Q99501 681 aaPredicted RBP28.16■■■□□ 2.1
CCDC117-204ENST00000444523 BCAS3Q9H6U6 928 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 SLC28A3Q9HAS3 691 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 HDAC6Q9UBN7 1215 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 RBM8AQ9Y5S9 174 aaKnown RBP28.16■■■□□ 2.1
CCDC117-204ENST00000444523 TRANK1O15050 2925 aa28.16■■■□□ 2.1
CCDC117-204ENST00000444523 SORBS3O60504 671 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 ZNF286BP0CG31 522 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 LAMC2Q13753 1193 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 DGKDQ16760 1214 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 RALYLQ86SE5 291 aaKnown RBP28.15■■■□□ 2.1
CCDC117-204ENST00000444523 SAMD3Q8N6K7 520 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 RETREG2Q8NC44 543 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 PPTC7Q8NI37 304 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 GTF2IRD1Q9UHL9 959 aa28.15■■■□□ 2.1
CCDC117-204ENST00000444523 PNMA6FA0A0J9YX94 578 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 ARHGEF15O94989 841 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 F2P00734 622 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 BFSP2Q13515 415 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 TCTN1Q2MV58 587 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 HSDL1Q3SXM5 330 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 TMEM67Q5HYA8 995 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 CELF3Q5SZQ8 465 aaKnown RBP28.14■■■□□ 2.1
CCDC117-204ENST00000444523 PPM1EQ8WY54 764 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 WNT8BQ93098 351 aa28.14■■■□□ 2.1
CCDC117-204ENST00000444523 GCOM1H8Y6P7 765 aaPredicted RBP28.13■■■□□ 2.09
CCDC117-204ENST00000444523 POLR2MP0CAP2 368 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms