RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 STX17P56962 302 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 LRMPQ12912 555 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 SPP2Q13103 211 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 MCM6Q14566 821 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 KRT79Q5XKE5 535 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
RER1-205ENST00000443438 CYP2W1Q8TAV3 490 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 KIAA1524Q8TCG1 905 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 SNX29Q8TEQ0 813 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 ZKSCAN4Q969J2 545 aaPredicted RBP9.63□□□□□ -0.87
RER1-205ENST00000443438 HOOK2Q96ED9 719 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 C12orf42Q96LP6 360 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 FEZ1Q99689 392 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 RAB34Q9BZG1 259 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 SLC38A10Q9HBR0 1119 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 RWDD2AQ9UIY3 292 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 VAV3Q9UKW4 847 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 PCDHA12Q9UN75 941 aa9.63□□□□□ -0.87
RER1-205ENST00000443438 STAT3P40763 770 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 USP14P54578 494 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 UBASH3AP57075 661 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 EHHADHQ08426 723 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 MTMR2Q13614 643 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 NR1I3Q14994 352 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 COBLL1Q53SF7 1204 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 PRR16Q569H4 304 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 DLK2Q6UY11 383 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 VSTM4Q8IW00 320 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 LRRC8AQ8IWT6 810 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 SLFN12Q8IYM2 578 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 ZNF280CQ8ND82 737 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 REPS2Q8NFH8 660 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 RASSF8Q8NHQ8 419 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.62□□□□□ -0.87
RER1-205ENST00000443438 NELFBQ8WX92 580 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 FAM20AQ96MK3 541 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 WRNIP1Q96S55 665 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 ADARB2Q9NS39 739 aaKnown RBP9.62□□□□□ -0.87
RER1-205ENST00000443438 SPTLC3Q9NUV7 552 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 IMPACTQ9P2X3 320 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 ADAMTS5Q9UNA0 930 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 CTNND2Q9UQB3 1225 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 DOCK1Q14185 1865 aa9.62□□□□□ -0.87
RER1-205ENST00000443438 SMCHD1A6NHR9 2005 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 SYNRGQ9UMZ2 1314 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 PVALEFA0A1B0GWK0 134 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 CBFA2T2O43439 604 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 COBLO75128 1261 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 MED24O75448 989 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 CFBP00751 764 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 STK4Q13043 487 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 TBX2Q13207 712 aaPredicted RBP9.61□□□□□ -0.87
RER1-205ENST00000443438 SUPT20HL1Q3ZLR7 823 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 KLHL10Q6JEL2 608 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 ARMCX5Q6P1M9 558 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 IRF2BP1Q8IU81 584 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 C17orf53Q8N3J3 647 aaPredicted RBP9.61□□□□□ -0.87
RER1-205ENST00000443438 LARP4BQ92615 738 aaKnown RBP9.61□□□□□ -0.87
RER1-205ENST00000443438 SLC5A5Q92911 643 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 DNAJC19Q96DA6 116 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 RPAP3Q9H6T3 665 aaPredicted RBP9.61□□□□□ -0.87
RER1-205ENST00000443438 AS3MTQ9HBK9 375 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 RAVER2Q9HCJ3 691 aaKnown RBP9.61□□□□□ -0.87
RER1-205ENST00000443438 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 LIMA1Q9UHB6 759 aaKnown RBP9.61□□□□□ -0.87
RER1-205ENST00000443438 CCPG1Q9ULG6 757 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 AFG3L2Q9Y4W6 797 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 PHIPQ8WWQ0 1821 aa9.61□□□□□ -0.87
RER1-205ENST00000443438 FRMPD4Q14CM0 1322 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 LRRC10BA6NIK2 292 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 EML1O00423 815 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 MEIS1O00470 390 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 NFIBO00712 420 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 MARCH6O60337 910 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 OFD1O75665 1012 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 PSMD10O75832 226 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 SERPINC1P01008 464 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 FCER1AP12319 257 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 CCT6AP40227 531 aaKnown RBP9.6□□□□□ -0.87
RER1-205ENST00000443438 PBX1P40424 430 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 PMS1P54277 932 aaKnown RBP9.6□□□□□ -0.87
RER1-205ENST00000443438 ASIC1P78348 528 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 CCZ1BP86790 482 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 CCZ1P86791 482 aaPredicted RBP9.6□□□□□ -0.87
RER1-205ENST00000443438 AMPD3Q01432 767 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 PDE4DQ08499 809 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 PAK1Q13153 545 aa9.6□□□□□ -0.87
RER1-205ENST00000443438 NOLC1Q14978 699 aaKnown RBP eCLIP9.6□□□□□ -0.87
RER1-205ENST00000443438 HSP90AA4PQ58FG1 418 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms