RNA–Protein interactions for RNA: ENST00000443037.1

SOX9-AS1-206, SOX9 antisense RNA 1, humanhuman

TSL 2

Gene SOX9-AS1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-206ENST00000443037 TBC1D5Q92609 795 aa16.26■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TAAR1Q96RJ0 339 aa16.26■□□□□ 0.19
SOX9-AS1-206ENST00000443037 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
SOX9-AS1-206ENST00000443037 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
SOX9-AS1-206ENST00000443037 A0A0C4DFX4 3053 aa16.26■□□□□ 0.19
SOX9-AS1-206ENST00000443037 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 MCM5P33992 734 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 EPHB4P54760 987 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 EMID1Q96A84 441 aaPredicted RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TMEM87BQ96K49 555 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 RNPC3Q96LT9 517 aaKnown RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 LZTS2Q9BRK4 669 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ALDH8A1Q9H2A2 487 aaPredicted RBP16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PXMP2Q9NR77 195 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 COL20A1Q9P218 1284 aa16.25■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CDH23Q9H251 3354 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 OPLAHO14841 1288 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 DDAH1O94760 285 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 NR3C2P08235 984 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TGFB3P10600 412 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 KIF5BP33176 963 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 LIFRP42702 1097 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 GNAQP50148 359 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ANTXR2P58335 489 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TMEM67Q5HYA8 995 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ZNF697Q5TEC3 545 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ESYT1Q9BSJ8 1104 aa16.24■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CYTH3O43739 400 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 B4GALT4O60513 344 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CFBP00751 764 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 GH1P01241 217 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 Q7L0L9 218 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 C16orf59Q7L2K0 433 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 RPUSD2Q8IZ73 545 aaKnown RBP16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 SPZ1Q9BXG8 430 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 SEMA6BQ9H3T3 888 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 HIPK3Q9H422 1215 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 IL23AQ9NPF7 189 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 DDX41Q9UJV9 622 aaKnown RBP16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 KAT6AQ92794 2004 aa16.23■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PPP1R11O60927 126 aaPredicted RBP16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 STAM2O75886 525 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CALM1P0DP23 149 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CALM2P0DP24 149 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CALM3P0DP25 149 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CSF2RAP15509 400 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 LAMC2Q13753 1193 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 VSIG10LQ86VR7 867 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 SESTD1Q86VW0 696 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PIGSQ96S52 555 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PDCD2LQ9BRP1 358 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 NOC4LQ9BVI4 516 aaKnown RBP16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 MTIF3Q9H2K0 278 aaKnown RBP16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 LY9Q9HBG7 655 aa16.22■□□□□ 0.19
SOX9-AS1-206ENST00000443037 GCOM1H8Y6P7 765 aaPredicted RBP16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ARIH2O95376 493 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PFKMP08237 780 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 MYL3P08590 195 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 POLR2MP0CAP2 368 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PTGS1P23219 599 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 PSMC6P62333 389 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 SLC35G1Q2M3R5 365 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TSGA10IPQ3SY00 556 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 SEPT14Q6ZU15 432 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TEX2Q8IWB9 1127 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 ZNF654Q8IZM8 581 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 HERVK_113Q902F9 699 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 TRPV6Q9H1D0 765 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 SENP2Q9HC62 589 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 BOLA1Q9Y3E2 137 aa16.21■□□□□ 0.19
SOX9-AS1-206ENST00000443037 CUL9Q8IWT3 2517 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 SLC27A2O14975 620 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 PRC1O43663 620 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 PPFIA4O75335 1185 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 HOXD8P13378 290 aaPredicted RBP16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 CYP2C18P33260 490 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 RFC2P35250 354 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 DGKDQ16760 1214 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 NBPF20Q3BBV1 942 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 COPS5Q92905 334 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 GUCD1Q96NT3 240 aa16.2■□□□□ 0.18
SOX9-AS1-206ENST00000443037 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms