RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 MRPS9P82933 396 aaKnown RBP15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 NBR1Q14596 966 aa15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 MAMDC4Q6UXC1 1216 aa15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 SEPT14Q6ZU15 432 aa15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 MSL3Q8N5Y2 521 aaKnown RBP15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 PLXNA1Q9UIW2 1896 aa15.44■□□□□ 0.06
TM9SF4-204ENST00000442842 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 TDP2O95551 362 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 SNAI1O95863 264 aaPredicted RBP15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 F13A1P00488 732 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 SLC9C1Q4G0N8 1177 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 PRAMEF19Q5SWL8 479 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
TM9SF4-204ENST00000442842 WNT7AO00755 349 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 EIF3JO75822 258 aaKnown RBP15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 BRD1O95696 1058 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 MYCP01106 439 aaPredicted RBP15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 CNGA1P29973 690 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 DDIT3P35638 169 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 ACVR2BQ13705 512 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 GNPTABQ3T906 1256 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 TTC38Q5R3I4 469 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 XRRA1Q6P2D8 792 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 FAM173BQ6P4H8 233 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 FBXO46Q6PJ61 603 aaPredicted RBP15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 MORC4Q8TE76 937 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 UIMC1Q96RL1 719 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 ZSCAN16Q9H4T2 348 aaPredicted RBP15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 VTA1Q9NP79 307 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 PKD2L1Q9P0L9 805 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 MRVI1Q9Y6F6 885 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 HTTP42858 3142 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 CASP8AP2Q9UKL3 1982 aa15.42■□□□□ 0.06
TM9SF4-204ENST00000442842 FAM86B1E9PN63 330 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 SORBS3O60504 671 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 STAM2O75886 525 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 CYP3A4P08684 503 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 FAM86B2P0C5J1 330 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 PDIA4P13667 645 aaKnown RBP15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 ITGB5P18084 799 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 USP11P51784 963 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 NUCB2P80303 420 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 CACNB2Q08289 660 aaPredicted RBP15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 MTMR1Q13613 665 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 CEP55Q53EZ4 464 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 PRR16Q569H4 304 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 MYSM1Q5VVJ2 828 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 CYP2W1Q8TAV3 490 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 CRYGNQ8WXF5 182 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 NAP1L4Q99733 375 aaKnown RBP15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 MXRA8Q9BRK3 442 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 ABHD16BQ9H3Z7 469 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 PDGFCQ9NRA1 345 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 DDX25Q9UHL0 483 aaKnown RBP15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 UBIAD1Q9Y5Z9 338 aa15.41■□□□□ 0.06
TM9SF4-204ENST00000442842 SLC37A4O43826 429 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 EDIL3O43854 480 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 CYBAP13498 195 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 MCM7P33993 719 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 ADCYAP1R1P41586 468 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 SETQ01105 290 aaPredicted RBP15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 ZNF174Q15697 407 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 PKN2Q16513 984 aaKnown RBP15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 RILPL1Q5EBL4 403 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 PLA2G4DQ86XP0 818 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 TRPV1Q8NER1 839 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 LENG1Q96BZ8 264 aaPredicted RBP15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 KATNBL1Q9H079 304 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 JADE2Q9NQC1 790 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 ZDHHC9Q9Y397 364 aa15.4■□□□□ 0.06
TM9SF4-204ENST00000442842 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 FIBPO43427 364 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 NEMFO60524 1076 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 RGS20O76081 388 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 ARIH2O95376 493 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 IGHA2P01877 340 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 ARP10275 920 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 GCFC2P16383 781 aaKnown RBP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 CCND3P30281 292 aaPredicted RBP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 CIITAP33076 1130 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 TRAPPC10P48553 1259 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 ANO1Q5XXA6 986 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 TAPT1Q6NXT6 567 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 SCFD2Q8WU76 684 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 GPRASP2Q96D09 838 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 FTOQ9C0B1 505 aaKnown RBP eCLIP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 MCOLN1Q9GZU1 580 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms