RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 LAMA3Q16787 3333 aa18.69■□□□□ 0.58
RBM39-215ENST00000442447 A6NJR5 290 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 TLR3O15455 904 aaKnown RBP18.68■□□□□ 0.58
RBM39-215ENST00000442447 GH1P01241 217 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 CCND2P30279 289 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 LRCH3Q96II8 777 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 ZFP91Q96JP5 570 aaPredicted RBP18.68■□□□□ 0.58
RBM39-215ENST00000442447 NAP1L2Q9ULW6 460 aaPredicted RBP18.68■□□□□ 0.58
RBM39-215ENST00000442447 MRVI1Q9Y6F6 885 aa18.68■□□□□ 0.58
RBM39-215ENST00000442447 KIAA1217Q5T5P2 1943 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 GOLGA8AA7E2F4 631 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 GOLGA8BA8MQT2 603 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 RGS20O76081 388 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 CD4P01730 458 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 ARHGAP1Q07960 439 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 USP17L6PQ6QN14 398 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 Q6ZUG5 572 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 AFG1LQ8WV93 481 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 CUL5Q93034 780 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 MTG1Q9BT17 334 aaPredicted RBP18.67■□□□□ 0.58
RBM39-215ENST00000442447 DDX41Q9UJV9 622 aaKnown RBP18.67■□□□□ 0.58
RBM39-215ENST00000442447 CNTNAP5Q8WYK1 1306 aa18.67■□□□□ 0.58
RBM39-215ENST00000442447 TIMP1P01033 207 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 APOBRQ0VD83 1088 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 LRIT3Q3SXY7 679 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 HEATR3Q7Z4Q2 680 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 GPKOWQ92917 476 aaPredicted RBP eCLIP18.66■□□□□ 0.589e-7■■□□□ 12.1
RBM39-215ENST00000442447 TRPV6Q9H1D0 765 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 FRMPD4Q14CM0 1322 aa18.66■□□□□ 0.58
RBM39-215ENST00000442447 SZT2Q5T011 3432 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 PIK3CDO00329 1044 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 MEIS2O14770 477 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 B4GALT4O60513 344 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 KPNA6O60684 536 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 MMP3P08254 477 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
RBM39-215ENST00000442447 SHHQ15465 462 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 C9orf50Q5SZB4 431 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 BRF1Q92994 677 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 SEZ6LQ9BYH1 1024 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 PPP1R12CQ9BZL4 782 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
RBM39-215ENST00000442447 FAM217BQ9NTX9 383 aaPredicted RBP18.65■□□□□ 0.58
RBM39-215ENST00000442447 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
RBM39-215ENST00000442447 SORBS3O60504 671 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 PSMA5P28066 241 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 CDC27P30260 824 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 RCAN1P53805 252 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 EPHB4P54760 987 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 FPGSQ05932 587 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 FUT2Q10981 343 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 USP26Q9BXU7 913 aa18.64■□□□□ 0.57
RBM39-215ENST00000442447 ALDH8A1Q9H2A2 487 aaPredicted RBP18.64■□□□□ 0.57
RBM39-215ENST00000442447 METAP2P50579 478 aaKnown RBP eCLIP18.63■□□□□ 0.57
RBM39-215ENST00000442447 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 MRPS9P82933 396 aaKnown RBP18.63■□□□□ 0.57
RBM39-215ENST00000442447 LAMC2Q13753 1193 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 UBE2SQ16763 222 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 FAM47CQ5HY64 1035 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 WWC2Q6AWC2 1192 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 KCNV1Q6PIU1 500 aa18.63■□□□□ 0.57
RBM39-215ENST00000442447 DHX37Q8IY37 1157 aaKnown RBP18.63■□□□□ 0.57
RBM39-215ENST00000442447 EMID1Q96A84 441 aaPredicted RBP18.63■□□□□ 0.57
RBM39-215ENST00000442447 V9GY48 417 aaPredicted RBP18.63■□□□□ 0.57
RBM39-215ENST00000442447 SCN10AQ9Y5Y9 1956 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 GGPS1O95749 300 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
RBM39-215ENST00000442447 CYP2C18P33260 490 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
RBM39-215ENST00000442447 SP2Q02086 613 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 CELF3Q5SZQ8 465 aaKnown RBP18.62■□□□□ 0.57
RBM39-215ENST00000442447 MFSD5Q6N075 450 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 HIPK3Q9H422 1215 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 TRMT13Q9NUP7 481 aaKnown RBP18.62■□□□□ 0.57
RBM39-215ENST00000442447 RTEL1Q9NZ71 1219 aa18.62■□□□□ 0.57
RBM39-215ENST00000442447 UMODL1Q5DID0 1318 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 STAM2O75886 525 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 TGFB3P10600 412 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 NAPAP54920 295 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 DGKDQ16760 1214 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 GNPTABQ3T906 1256 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 MYSM1Q5VVJ2 828 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 PCNX4Q63HM2 1172 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 TYW1BQ6NUM6 668 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 FBXL16Q8N461 479 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 INPP4AQ96PE3 977 aaPredicted RBP18.61■□□□□ 0.57
RBM39-215ENST00000442447 NOC4LQ9BVI4 516 aaKnown RBP18.61■□□□□ 0.57
RBM39-215ENST00000442447 AGXT2Q9BYV1 514 aa18.61■□□□□ 0.57
RBM39-215ENST00000442447 CCDC196A0A1B0GTZ2 297 aa18.6■□□□□ 0.57
RBM39-215ENST00000442447 CYP2C9P11712 490 aa18.6■□□□□ 0.57
RBM39-215ENST00000442447 CSF2RAP15509 400 aa18.6■□□□□ 0.57
RBM39-215ENST00000442447 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms