RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PTH1RQ03431 593 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 ARHGAP1Q07960 439 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 TMEM67Q5HYA8 995 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 KCNV1Q6PIU1 500 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 DEFB128Q7Z7B8 93 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
TTC28-203ENST00000442232 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
TTC28-203ENST00000442232 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
TTC28-203ENST00000442232 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
TTC28-203ENST00000442232 TRIP12Q14669 1992 aaPredicted RBP13.65□□□□□ -0.22
TTC28-203ENST00000442232 PALM3A6NDB9 673 aaPredicted RBP13.65□□□□□ -0.22
TTC28-203ENST00000442232 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
TTC28-203ENST00000442232 SGSM2O43147 1006 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
TTC28-203ENST00000442232 CCND2P30279 289 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 PTGISQ16647 500 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
TTC28-203ENST00000442232 C7orf31Q8N865 590 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
TTC28-203ENST00000442232 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 HOXA13P31271 388 aaPredicted RBP13.64□□□□□ -0.23
TTC28-203ENST00000442232 KIF5BP33176 963 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
TTC28-203ENST00000442232 PPP1R13LQ8WUF5 828 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 EMID1Q96A84 441 aaPredicted RBP13.64□□□□□ -0.23
TTC28-203ENST00000442232 MTMR8Q96EF0 704 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 PIGSQ96S52 555 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 PRDM12Q9H4Q4 367 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
TTC28-203ENST00000442232 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
TTC28-203ENST00000442232 KCNJ6P48051 423 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 PSEN2P49810 448 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 GHRHRQ02643 423 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 PGM5Q15124 567 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 NFXL1Q6ZNB6 911 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 SESTD1Q86VW0 696 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
TTC28-203ENST00000442232 CUL5Q93034 780 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 SLC9A7Q96T83 725 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
TTC28-203ENST00000442232 RIOX1Q9H6W3 641 aa13.63□□□□□ -0.23
TTC28-203ENST00000442232 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
TTC28-203ENST00000442232 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
TTC28-203ENST00000442232 A0A0C4DFX4 3053 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 OPLAHO14841 1288 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
TTC28-203ENST00000442232 DDAH1O94760 285 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
TTC28-203ENST00000442232 IQCF3P0C7M6 154 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 ZNF286BP0CG31 522 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 IGFBP4P22692 258 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 RABGGTBP53611 331 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 MFSD10Q14728 455 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 GNPTABQ3T906 1256 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 PPM1EQ8WY54 764 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
TTC28-203ENST00000442232 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 UNC80Q8N2C7 3258 aa13.62□□□□□ -0.23
TTC28-203ENST00000442232 CCDC69A6NI79 296 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 GGPS1O95749 300 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 TGFB3P10600 412 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 SELPP16109 830 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 TROAPQ12815 778 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 KIAA0753Q2KHM9 967 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 GDF6Q6KF10 455 aaPredicted RBP13.61□□□□□ -0.23
TTC28-203ENST00000442232 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
TTC28-203ENST00000442232 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 LZTS2Q9BRK4 669 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
TTC28-203ENST00000442232 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
TTC28-203ENST00000442232 YBX2Q9Y2T7 364 aaKnown RBP13.61□□□□□ -0.23
TTC28-203ENST00000442232 NOP56O00567 594 aaKnown RBP13.6□□□□□ -0.23
TTC28-203ENST00000442232 PRC1O43663 620 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 SORBS3O60504 671 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 STAM2O75886 525 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 F2P00734 622 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 MCM5P33992 734 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 GNAQP50148 359 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 CELF3Q5SZQ8 465 aaKnown RBP13.6□□□□□ -0.23
TTC28-203ENST00000442232 LRRC8DQ7L1W4 858 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 VSIG10LQ86VR7 867 aa13.6□□□□□ -0.23
TTC28-203ENST00000442232 ZNF654Q8IZM8 581 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms