RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 UHRF1Q96T88 793 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CNNM2Q9H8M5 875 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CTNNA3Q9UI47 895 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 YBX2Q9Y2T7 364 aaKnown RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 FGAP02671 866 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 HOXD8P13378 290 aaPredicted RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 KCNJ6P48051 423 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CTDSPL2Q05D32 466 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 LAMC2Q13753 1193 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 STXBP2Q15833 593 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 NBPF20Q3BBV1 942 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 CCDC62Q6P9F0 684 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 HERC6Q8IVU3 1022 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 SEC62Q99442 399 aaKnown RBP6.98□□□□□ -1.29
PTPRR-204ENST00000440835 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 PDGFCQ9NRA1 345 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 TMEM51Q9NW97 253 aa6.98□□□□□ -1.29
PTPRR-204ENST00000440835 MYH6P13533 1939 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 EIF3JO75822 258 aaKnown RBP6.97□□□□□ -1.29
PTPRR-204ENST00000440835 STAM2O75886 525 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 RPLP2P05387 115 aaKnown RBP6.97□□□□□ -1.29
PTPRR-204ENST00000440835 TXNP10599 105 aaKnown RBP6.97□□□□□ -1.29
PTPRR-204ENST00000440835 TGFB3P10600 412 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 HSPD1P10809 573 aaKnown RBP6.97□□□□□ -1.29
PTPRR-204ENST00000440835 SELPP16109 830 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 RPS6P62753 249 aaKnown RBP6.97□□□□□ -1.29
PTPRR-204ENST00000440835 NUCB1Q02818 461 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 PTK7Q13308 1070 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 ADGRE1Q14246 886 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 DGKDQ16760 1214 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 OTOP2Q7RTS6 562 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 SPRYD3Q8NCJ5 442 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 KRT23Q9C075 422 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 NOD1Q9Y239 953 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 SIP14410 1827 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 ZBBXA8MT70 800 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 NFIBO00712 420 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 BMP1P13497 986 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 TERF1P54274 439 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 CCL23P55773 120 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 VWCEQ96DN2 955 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 DSCC1Q9BVC3 393 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 MTCH2Q9Y6C9 303 aa6.97□□□□□ -1.29
PTPRR-204ENST00000440835 GRXCR1A8MXD5 290 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 CLGNO14967 610 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 IGFBP4P22692 258 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 CALML3P27482 149 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 ANAPC15P60006 121 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 PSMC6P62333 389 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 ANKRD45Q5TZF3 282 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 PPTC7Q8NI37 304 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.29
PTPRR-204ENST00000440835 COL4A4P53420 1690 aaPredicted RBP6.96□□□□□ -1.29
PTPRR-204ENST00000440835 RALGAPA2Q2PPJ7 1873 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 SZT2Q5T011 3432 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 UMODL1Q5DID0 1318 aa6.96□□□□□ -1.29
PTPRR-204ENST00000440835 HAS3O00219 553 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 ZNF213O14771 459 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 PPFIA4O75335 1185 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 MMP3P08254 477 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 PTGISQ16647 500 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 SLC30A10Q6XR72 485 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 RAD9AQ99638 391 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 KCNH6Q9H252 994 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 KAT14Q9H8E8 782 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 UPF2Q9HAU5 1272 aaKnown RBP6.96□□□□□ -1.3
PTPRR-204ENST00000440835 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 TOMM22Q9NS69 142 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.3
PTPRR-204ENST00000440835 GTF2IRD1Q9UHL9 959 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 SCN5AQ14524 2016 aa6.96□□□□□ -1.3
PTPRR-204ENST00000440835 NCK2O43639 380 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 NMT2O60551 498 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 COL9A1P20849 921 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 PLA2G5P39877 138 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 HSD17B4P51659 736 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 IRX5P78411 483 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 TAP1Q03518 808 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 ARHGAP1Q07960 439 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 TSHZ3Q63HK5 1081 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 XRRA1Q6P2D8 792 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 LRRC8DQ7L1W4 858 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 HLA-CQ95604 372 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 ZNF830Q96NB3 372 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 FTOQ9C0B1 505 aaKnown RBP eCLIP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 PTPRSQ13332 1948 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 F2P00734 622 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 PARP1P09874 1014 aaKnown RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 SLC16A2P36021 539 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 ERVK-21P61565 698 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 IKBKEQ14164 716 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 CDC37Q16543 378 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-204ENST00000440835 FAM47CQ5HY64 1035 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 EEPD1Q7L9B9 569 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
PTPRR-204ENST00000440835 FBXO11Q86XK2 927 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms