RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 KCNB2Q92953 911 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 RMDN3Q96TC7 470 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 AMNQ9BXJ7 453 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 MAD2L2Q9UI95 211 aa18.62■□□□□ 0.57
ITGB1-207ENST00000439974 KIAA1217Q5T5P2 1943 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 KLRF2D3W0D1 207 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 CYP2C9P11712 490 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 PBX2P40425 430 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 RAB30Q15771 203 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 STXBP2Q15833 593 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 SLC35G1Q2M3R5 365 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 TSGA10IPQ3SY00 556 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 ARHGEF16Q5VV41 709 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 OTOP2Q7RTS6 562 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 CATIPQ7Z7H3 387 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 SCLYQ96I15 445 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-207ENST00000439974 PRUNE2Q8WUY3 3088 aa18.61■□□□□ 0.57
ITGB1-207ENST00000439974 CFBP00751 764 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 GH1P01241 217 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 PFKMP08237 780 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
ITGB1-207ENST00000439974 PTPN11Q06124 597 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-207ENST00000439974 GRM4Q14833 912 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 SEPT14Q6ZU15 432 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 ZNF654Q8IZM8 581 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 PIBF1Q8WXW3 757 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 MSRAQ9UJ68 235 aa18.6■□□□□ 0.57
ITGB1-207ENST00000439974 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
ITGB1-207ENST00000439974 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 ZBTB5O15062 677 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
ITGB1-207ENST00000439974 HSD17B4P51659 736 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 GHRHRQ02643 423 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 TROAPQ12815 778 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 KRT32Q14532 448 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 LY6KQ17RY6 165 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 DHX32Q7L7V1 743 aaKnown RBP18.59■□□□□ 0.57
ITGB1-207ENST00000439974 MTMR8Q96EF0 704 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 TMEM87BQ96K49 555 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 PXMP2Q9NR77 195 aa18.59■□□□□ 0.57
ITGB1-207ENST00000439974 MAP3K20Q9NYL2 800 aaKnown RBP18.59■□□□□ 0.57
ITGB1-207ENST00000439974 OPLAHO14841 1288 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.56
ITGB1-207ENST00000439974 NR3C2P08235 984 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 MMP3P08254 477 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 CASTP20810 708 aaKnown RBP18.58■□□□□ 0.56
ITGB1-207ENST00000439974 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 CMTR1Q8N1G2 835 aaKnown RBP18.58■□□□□ 0.56
ITGB1-207ENST00000439974 AFG1LQ8WV93 481 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 COL25A1Q9BXS0 654 aaPredicted RBP18.58■□□□□ 0.56
ITGB1-207ENST00000439974 BRPF3Q9ULD4 1205 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 SLC4A7Q9Y6M7 1214 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 GBF1Q92538 1859 aa18.58■□□□□ 0.56
ITGB1-207ENST00000439974 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
ITGB1-207ENST00000439974 ZBBXA8MT70 800 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 PITPNM1O00562 1244 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 PPP1R11O60927 126 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-207ENST00000439974 TRAF1Q13077 416 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 SAMD3Q8N6K7 520 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 PPP1R13LQ8WUF5 828 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 VWCEQ96DN2 955 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 GAS2L1Q99501 681 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-207ENST00000439974 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-207ENST00000439974 NOD1Q9Y239 953 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 PCDHA1Q9Y5I3 950 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 VCANP13611 3396 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 SCN5AQ14524 2016 aa18.57■□□□□ 0.56
ITGB1-207ENST00000439974 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 RFC2P35250 354 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 CHMP4BP1P59074 171 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 BFSP2Q13515 415 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 BLOC1S2Q6QNY1 142 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 Q6ZUG5 572 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 MICU3Q86XE3 530 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 NKX2-4Q9H2Z4 354 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 RIOX1Q9H6W3 641 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 DDX41Q9UJV9 622 aaKnown RBP18.56■□□□□ 0.56
ITGB1-207ENST00000439974 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 TANC1Q9C0D5 1861 aa18.56■□□□□ 0.56
ITGB1-207ENST00000439974 CYTH3O43739 400 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 DDAH1O94760 285 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 RPS6KB1P23443 525 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 LIFRP42702 1097 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 FGD1P98174 961 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 APOBRQ0VD83 1088 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 DGKDQ16760 1214 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 C8orf34Q49A92 452 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 DEFB128Q7Z7B8 93 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 SESTD1Q86VW0 696 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 EMID1Q96A84 441 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-207ENST00000439974 PIGSQ96S52 555 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 PDCD2LQ9BRP1 358 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 LARP6Q9BRS8 491 aaKnown RBP18.55■□□□□ 0.56
ITGB1-207ENST00000439974 MTA3Q9BTC8 594 aa18.55■□□□□ 0.56
ITGB1-207ENST00000439974 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms