RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 KIAA1217Q5T5P2 1943 aa18.86■□□□□ 0.61
SNRPD3-204ENST00000439775 SLC27A2O14975 620 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 PRC1O43663 620 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 HOXA13P31271 388 aaPredicted RBP18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 KIF5BP33176 963 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 PGM5Q15124 567 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 FAM47CQ5HY64 1035 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 TMTC2Q8N394 836 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 CTCFLQ8NI51 663 aaPredicted RBP18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 MRVI1Q9Y6F6 885 aa18.85■□□□□ 0.61
SNRPD3-204ENST00000439775 FRMPD4Q14CM0 1322 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 SH2B2O14492 632 aaPredicted RBP18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 RGS20O76081 388 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 FGBP02675 491 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 PFKMP08237 780 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 CYP2C9P11712 490 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 SMARCA1P28370 1054 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 LIFRP42702 1097 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 CREB3L3Q68CJ9 461 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 KCNV1Q6PIU1 500 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 VSIG10LQ86VR7 867 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 SESTD1Q86VW0 696 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 PPTC7Q8NI37 304 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 EYSQ5T1H1 3165 aa18.84■□□□□ 0.61
SNRPD3-204ENST00000439775 CASTP20810 708 aaKnown RBP18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 CCND2P30279 289 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 DGKDQ16760 1214 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 IL31RAQ8NI17 732 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 TIFAQ96CG3 184 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 VWCEQ96DN2 955 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 MYL10Q9BUA6 226 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 UNC80Q8N2C7 3258 aa18.83■□□□□ 0.6
SNRPD3-204ENST00000439775 A0A0C4DFX4 3053 aa18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 MYCLP12524 364 aaPredicted RBP18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 HOXD8P13378 290 aaPredicted RBP18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 GNAQP50148 359 aa18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 KAT2BQ92831 832 aa18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 RRP36Q96EU6 259 aaKnown RBP18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 SCLYQ96I15 445 aa18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 PBX4Q9BYU1 374 aa18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 CXXC1Q9P0U4 656 aaPredicted RBP18.82■□□□□ 0.6
SNRPD3-204ENST00000439775 CCDC69A6NI79 296 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 F2P00734 622 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 CALM1P0DP23 149 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 CALM2P0DP24 149 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 CALM3P0DP25 149 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 TGFB3P10600 412 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 RFC2P35250 354 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 RNF20Q5VTR2 975 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 NFXL1Q6ZNB6 911 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 OTOP2Q7RTS6 562 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 FCHSD1Q86WN1 690 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 DHX37Q8IY37 1157 aaKnown RBP18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 KATNAL1Q9BW62 490 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 SEC63Q9UGP8 760 aaKnown RBP18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 NOD1Q9Y239 953 aa18.81■□□□□ 0.6
SNRPD3-204ENST00000439775 TANC1Q9C0D5 1861 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 STAM2O75886 525 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 UBA1P22314 1058 aaKnown RBP18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 BFSP2Q13515 415 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 RAB30Q15771 203 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 PTGISQ16647 500 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 CELF3Q5SZQ8 465 aaKnown RBP18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 MYSM1Q5VVJ2 828 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 SKAP1Q86WV1 359 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 PPP1R13LQ8WUF5 828 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 PIBF1Q8WXW3 757 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 MYLIPQ8WY64 445 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 CTAGE1Q96RT6 745 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 ZNF576Q9H609 170 aa18.8■□□□□ 0.6
SNRPD3-204ENST00000439775 GRXCR1A8MXD5 290 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 PIK3CDO00329 1044 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 PLEKHA8P1O95397 391 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 FOSL2P15408 326 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 PBX2P40425 430 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 GNPTABQ3T906 1256 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 SGMS1Q86VZ5 419 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 SRBD1Q8N5C6 995 aaKnown RBP18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 RETREG2Q8NC44 543 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 MAFAQ8NHW3 353 aaPredicted RBP18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 INPP4AQ96PE3 977 aaPredicted RBP18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 GTF2IRD1Q9UHL9 959 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 SLC12A7Q9Y666 1083 aa18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
SNRPD3-204ENST00000439775 CHD9Q3L8U1 2897 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 HAS3O00219 553 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 PPFIA4O75335 1185 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 GGPS1O95749 300 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 IQCF3P0C7M6 154 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 ZNF286BP0CG31 522 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 PSEN2P49810 448 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms