RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SPDYE3A6NKU9 549 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 ST18O60284 1047 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 CCDC83Q8IWF9 413 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 SCFD2Q8WU76 684 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 PGBD1Q96JS3 809 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 GLT8D2Q9H1C3 349 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 C6orf50Q9HD87 102 aa22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 ORC3Q9UBD5 711 aaPredicted RBP22.33■■□□□ 1.17
SEMA3B-206ENST00000439487 STK36Q9NRP7 1315 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 MYADML2A6NDP7 307 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 DYNC1LI2O43237 492 aaPredicted RBP22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 ARIH2O95376 493 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 CLK2P49760 499 aaKnown RBP22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 MRPS9P82933 396 aaKnown RBP22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 DUSP28Q4G0W2 176 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 JAKMIP3Q5VZ66 844 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 NECAB2Q7Z6G3 386 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 RNF180Q86T96 592 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 NSUN7Q8NE18 718 aaKnown RBP22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 CCDC148Q8NFR7 591 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 SH3GLB2Q9NR46 395 aa22.32■■□□□ 1.16
SEMA3B-206ENST00000439487 DNM1LO00429 736 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 JAK2O60674 1132 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 RGS20O76081 388 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 CD2BP2O95400 341 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 C6orf222P0C671 652 aaPredicted RBP22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 TXNP10599 105 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 FDPSP14324 419 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 GJA9P57773 515 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 NLRP5P59047 1200 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 TTLL4Q14679 1199 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 TLK2Q86UE8 772 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 COPS5Q92905 334 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 UPF3AQ9H1J1 476 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 C11orf49Q9H6J7 331 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 RTEL1Q9NZ71 1219 aa22.31■■□□□ 1.16
SEMA3B-206ENST00000439487 KBTBD13C9JR72 458 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 FOSP01100 380 aaPredicted RBP22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 GNA11P29992 359 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 PCNX4Q63HM2 1172 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 CCDC62Q6P9F0 684 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 TEX2Q8IWB9 1127 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 KLHDC9Q8NEP7 349 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 ANO3Q9BYT9 981 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 AP5M1Q9H0R1 490 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 SPC25Q9HBM1 224 aa22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 SH2B1Q9NRF2 756 aaPredicted RBP22.3■■□□□ 1.16
SEMA3B-206ENST00000439487 DNAH12Q6ZR08 3092 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 CTAGE5O15320 804 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 COL6A1P12109 1028 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 BEX3Q00994 111 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 AP3B2Q13367 1082 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 LY6KQ17RY6 165 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 RASGRP4Q8TDF6 673 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 SENP6Q9GZR1 1112 aaPredicted RBP22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 EHMT1Q9H9B1 1298 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 Q9Y3F1 56 aa22.29■■□□□ 1.16
SEMA3B-206ENST00000439487 NKRFO15226 690 aaKnown RBP eCLIP22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 KCNA10Q16322 511 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 GNASQ5JWF2 1037 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 XRRA1Q6P2D8 792 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 REXO1Q8N1G1 1221 aaKnown RBP22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 IL27Q8NEV9 243 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 OR6J1Q8NGC5 347 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 BICD2Q8TD16 824 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 WASF1Q92558 559 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 FERMT2Q96AC1 680 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 ALG1Q9BT22 464 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 GJB4Q9NTQ9 266 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 DDX41Q9UJV9 622 aaKnown RBP22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 KCNJ14Q9UNX9 436 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 MRVI1Q9Y6F6 885 aa22.28■■□□□ 1.16
SEMA3B-206ENST00000439487 CEP290O15078 2479 aa22.27■■□□□ 1.16
SEMA3B-206ENST00000439487 STAM2O75886 525 aa22.27■■□□□ 1.16
SEMA3B-206ENST00000439487 CST5P28325 142 aaPredicted RBP22.27■■□□□ 1.16
SEMA3B-206ENST00000439487 CCSAPQ6IQ19 270 aaPredicted RBP22.27■■□□□ 1.16
SEMA3B-206ENST00000439487 PCDHA4Q9UN74 947 aa22.27■■□□□ 1.16
SEMA3B-206ENST00000439487 NKX3-2P78367 333 aa22.26■■□□□ 1.15
SEMA3B-206ENST00000439487 FSCN1Q16658 493 aaKnown RBP22.26■■□□□ 1.15
SEMA3B-206ENST00000439487 INPP4AQ96PE3 977 aaPredicted RBP22.26■■□□□ 1.15
SEMA3B-206ENST00000439487 TSEN34Q9BSV6 310 aaKnown RBP22.26■■□□□ 1.15
SEMA3B-206ENST00000439487 PHF24Q9UPV7 400 aa22.26■■□□□ 1.15
SEMA3B-206ENST00000439487 XBP1P17861 261 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 SREBF1P36956 1147 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 ACLYP53396 1101 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 FOSBP53539 338 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 SP2Q02086 613 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 SEMA3FQ13275 785 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 NPY5RQ15761 445 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 GNPTABQ3T906 1256 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 KCNV1Q6PIU1 500 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 BLIDQ8IZY5 108 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 FAM177A1Q8N128 213 aaPredicted RBP22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 PCSK9Q8NBP7 692 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 TMX3Q96JJ7 454 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 LLPHQ9BRT6 129 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 HTATIP2Q9BUP3 242 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 PHF20Q9BVI0 1012 aa22.25■■□□□ 1.15
SEMA3B-206ENST00000439487 SORBS3O60504 671 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms