RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 ATRIPQ8WXE1 791 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 CCSER1Q9C0I3 900 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 LAD1O00515 517 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 CAP2P40123 477 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 PRPHP41219 470 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 COPB1P53618 953 aaKnown RBP15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 SNAP25P60880 206 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 TNFAIP1Q13829 316 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 UBE2SQ16763 222 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 RAD9BQ6WBX8 426 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 IRX2Q9BZI1 471 aaPredicted RBP15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 RIC8AQ9NPQ8 531 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 LZTFL1Q9NQ48 299 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 KBTBD4Q9NVX7 518 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 ATAD5Q96QE3 1844 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 TULP2O00295 520 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 PES1O00541 588 aaKnown RBP15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 KLRC4O43908 158 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 KIAA1755Q5JYT7 1200 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 ADSSL1Q8N142 457 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 TEPSINQ96N21 525 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 TMX2Q9Y320 296 aa15.52■□□□□ 0.08
PTCHD3-201ENST00000438700 ARHGAP27Q6ZUM4 889 aa15.52■□□□□ 0.07
PTCHD3-201ENST00000438700 ANKRD20A12PQ8NF67 263 aa15.52■□□□□ 0.07
PTCHD3-201ENST00000438700 CUL5Q93034 780 aa15.52■□□□□ 0.07
PTCHD3-201ENST00000438700 HACL1Q9UJ83 578 aa15.52■□□□□ 0.07
PTCHD3-201ENST00000438700 RNF225M0QZC1 329 aaPredicted RBP15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 CCDC175P0C221 793 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 TXKP42681 527 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 MAP3K10Q02779 954 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 SYDE2Q5VT97 1194 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 PCDHA1Q9Y5I3 950 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 GOLGA6L9A6NEM1 432 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 CASQ1P31415 396 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 UBXN1Q04323 297 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 ZYXQ15942 572 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 CCDC84Q86UT8 332 aaPredicted RBP15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 IRF2BP1Q8IU81 584 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 CNGA4Q8IV77 575 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 PSTPIP2Q9H939 334 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 GOPCQ9HD26 462 aa15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 DICER1Q9UPY3 1922 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-201ENST00000438700 LRRC10BA6NIK2 292 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 SPAG1Q07617 926 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 TRIM47Q96LD4 638 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 GLIS2Q9BZE0 524 aaPredicted RBP15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 RHOBTB3O94955 611 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 TPM1P09493 284 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 OAS2P29728 719 aaKnown RBP15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 CLK2P49760 499 aaKnown RBP15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 MRPL12P52815 198 aaKnown RBP15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 ASIC1P78348 528 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 RAD51AP2Q09MP3 1159 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 KCNB1Q14721 858 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 FAM83BQ5T0W9 1011 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 AK8Q96MA6 479 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 ADGRG1Q9Y653 693 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 ITIH6Q6UXX5 1313 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 MYH7BA7E2Y1 1941 aa15.5■□□□□ 0.07
PTCHD3-201ENST00000438700 PHF20L1A8MW92 1017 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 H7C1D1 291 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 PSMA7O14818 248 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 SLC37A4O43826 429 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 TDP2O95551 362 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 ASNSP08243 561 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 TEX35Q5T0J7 233 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 SRRTQ9BXP5 876 aaKnown RBP15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 TRIM9Q9C026 710 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 DEFB129Q9H1M3 183 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 SBF1O95248 1867 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 STAT2P52630 851 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 PDE4DQ08499 809 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 STIM1Q13586 685 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 USH1GQ495M9 461 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 GIMAP8Q8ND71 665 aaPredicted RBP15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 MMTAG2Q9BU76 263 aaKnown RBP15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 AMNQ9BXJ7 453 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 NAA15Q9BXJ9 866 aaKnown RBP15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 ABHD10Q9NUJ1 306 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 ARGLU1Q9NWB6 273 aaPredicted RBP15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 PRR12Q9ULL5 1215 aa15.49■□□□□ 0.07
PTCHD3-201ENST00000438700 FCER1AP12319 257 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 TAL1P17542 331 aaPredicted RBP15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 LMNB1P20700 586 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 CALCRLQ16602 461 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 CC2D1AQ6P1N0 951 aaPredicted RBP15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 FBXO11Q86XK2 927 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 PLCD3Q8N3E9 789 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 ACRBPQ8NEB7 543 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 KIFC2Q96AC6 838 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms