RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 UBXN2AP68543 259 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 NUCB2P80303 420 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 PKN2Q16513 984 aaKnown RBP12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 MFSD14CQ5VZR4 134 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 ARMCX2Q7L311 632 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 NEK8Q86SG6 692 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 PTPN22Q9Y2R2 807 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 DOCK5Q9H7D0 1870 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 ABCB7O75027 752 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 HMGCRP04035 888 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 CYP3A4P08684 503 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZNF76P36508 570 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 CCL14Q16627 93 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 INF2Q27J81 1249 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 FERMT3Q86UX7 667 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 VSIG10LQ86VR7 867 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 IL31RAQ8NI17 732 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 CRYGNQ8WXF5 182 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 TRIB2Q92519 343 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 VTA1Q9NP79 307 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 PTCH2Q9Y6C5 1203 aa12.02□□□□□ -0.49
HLA-DMB-259ENST00000438510 F13A1P00488 732 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 GRK4P32298 578 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 DDIT3P35638 169 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 SETQ01105 290 aaPredicted RBP12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 RESTQ13127 1097 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 ORC2Q13416 577 aaPredicted RBP12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 LETM2Q2VYF4 491 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 CDHR1Q96JP9 859 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 FLRT1Q9NZU1 646 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 TCHHQ07283 1943 aa12.01□□□□□ -0.49
HLA-DMB-259ENST00000438510 FAM205CA6NFA0 338 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 MAFGO15525 162 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 CCNT1O60563 726 aaKnown RBP12□□□□□ -0.49
HLA-DMB-259ENST00000438510 BRD1O95696 1058 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 IGHA2P01877 340 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 ELNP15502 786 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 CIITAP33076 1130 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 CYP2C19P33261 490 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 MRPS9P82933 396 aaKnown RBP12□□□□□ -0.49
HLA-DMB-259ENST00000438510 ACVR2BQ13705 512 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 PKP1Q13835 747 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 SLC9C1Q4G0N8 1177 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 CEP55Q53EZ4 464 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 EARS2Q5JPH6 523 aaKnown RBP12□□□□□ -0.49
HLA-DMB-259ENST00000438510 MYSM1Q5VVJ2 828 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 PPP4R3AQ6IN85 833 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 NIPA1Q7RTP0 329 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 GPRASP2Q96D09 838 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 INPP4AQ96PE3 977 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-259ENST00000438510 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZHX1Q9UKY1 873 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-259ENST00000438510 ATP6V1DQ9Y5K8 247 aa12□□□□□ -0.49
HLA-DMB-259ENST00000438510 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 FIBPO43427 364 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 SNAI1O95863 264 aaPredicted RBP11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 CYP3A7P24462 503 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 MTMR1Q13613 665 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 TTC38Q5R3I4 469 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 FBXO16Q8IX29 292 aaPredicted RBP11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 JADE2Q9NQC1 790 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 RTEL1Q9NZ71 1219 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 CHMP5Q9NZZ3 219 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 UBIAD1Q9Y5Z9 338 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 MRVI1Q9Y6F6 885 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 WDR81Q562E7 1941 aa11.99□□□□□ -0.49
HLA-DMB-259ENST00000438510 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 FAM86B1E9PN63 330 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 MEIS1O00470 390 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 TDP2O95551 362 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 INHAP05111 366 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 FAM86B2P0C5J1 330 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 TGFB3P10600 412 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 CYBAP13498 195 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 ICAM3P32942 547 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 TTLL4Q14679 1199 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 Q4G0T1 1027 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 PRR16Q569H4 304 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 MAP3K21Q5TCX8 1036 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 FOXD4L5Q5VV16 416 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms