RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
SGCE-205ENST00000437425 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGCE-205ENST00000437425 RAD54LQ92698 747 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 FANCLQ9NW38 375 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 ZHX2Q9Y6X8 837 aa17.23■□□□□ 0.35
SGCE-205ENST00000437425 POTEMA6NI47 508 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 MUTP22033 750 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 NF2P35240 595 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
SGCE-205ENST00000437425 UBASH3AP57075 661 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 SPAG1Q07617 926 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 PAK1Q13153 545 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 SH3D19Q5HYK7 790 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 NIPA1Q7RTP0 329 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 GIMAP8Q8ND71 665 aaPredicted RBP17.22■□□□□ 0.35
SGCE-205ENST00000437425 STAMQ92783 540 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
SGCE-205ENST00000437425 LENG9Q96B70 501 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 PNMA5Q96PV4 448 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 HSD3B7Q9H2F3 369 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 IFNKQ9P0W0 207 aa17.22■□□□□ 0.35
SGCE-205ENST00000437425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SGCE-205ENST00000437425 FAM86B1E9PN63 330 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 PSMA7O14818 248 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 FAM86B2P0C5J1 330 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
SGCE-205ENST00000437425 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.35
SGCE-205ENST00000437425 PSMD2Q13200 908 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 COG2Q14746 738 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 TPD52L1Q16890 204 aaPredicted RBP17.21■□□□□ 0.35
SGCE-205ENST00000437425 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
SGCE-205ENST00000437425 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
SGCE-205ENST00000437425 XPO4Q9C0E2 1151 aaKnown RBP17.21■□□□□ 0.35
SGCE-205ENST00000437425 BLOC1S4Q9NUP1 217 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 CSADQ9Y600 493 aa17.21■□□□□ 0.35
SGCE-205ENST00000437425 VWA5AO00534 786 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 ATP2A1O14983 1001 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 NRDCO43847 1150 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 KLRC4O43908 158 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 GRIN3BO60391 1043 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 USP2O75604 605 aaPredicted RBP17.21■□□□□ 0.34
SGCE-205ENST00000437425 BCRP11274 1271 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 RPA1P27694 616 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 CASP1P29466 404 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 IREB2P48200 963 aaKnown RBP17.21■□□□□ 0.34
SGCE-205ENST00000437425 ASIC1P78348 528 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 CEP55Q53EZ4 464 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 UNC13DQ70J99 1090 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 NOC3LQ8WTT2 800 aaKnown RBP17.21■□□□□ 0.34
SGCE-205ENST00000437425 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 PLIN2Q99541 437 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 WDR11Q9BZH6 1224 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 AFG3L2Q9Y4W6 797 aa17.21■□□□□ 0.34
SGCE-205ENST00000437425 SSC5DA1L4H1 1573 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 IGLV3-22A0A075B6J6 115 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 BICDL2A1A5D9 508 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 MSH4O15457 936 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 DSG3P32926 999 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 ADSSL1Q8N142 457 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 CCDC150Q8NCX0 1101 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
SGCE-205ENST00000437425 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
SGCE-205ENST00000437425 FRMPD4Q14CM0 1322 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 RPTORQ8N122 1335 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 IQCA1LA6NCM1 817 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 MEIS1O00470 390 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 ALAS1P13196 640 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
SGCE-205ENST00000437425 PDE4DQ08499 809 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 SPIRE1Q08AE8 756 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 FOXR2Q6PJQ5 311 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
SGCE-205ENST00000437425 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
SGCE-205ENST00000437425 RRAGDQ9NQL2 400 aaPredicted RBP17.19■□□□□ 0.34
SGCE-205ENST00000437425 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.19■□□□□ 0.34
SGCE-205ENST00000437425 HMGCS2P54868 508 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 CDKAL1Q5VV42 579 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 PRAMEF18Q5VWM3 479 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 NELFBQ8WX92 580 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 RIT2Q99578 217 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
SGCE-205ENST00000437425 TUFT1Q9NNX1 390 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 DNM3Q9UQ16 869 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 CTNND2Q9UQB3 1225 aa17.18■□□□□ 0.34
SGCE-205ENST00000437425 ATP1A3P13637 1013 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms