RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IGLV3-22A0A075B6J6 115 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 PPP1R3GB7ZBB8 358 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 MSH4O15457 936 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 TPM4P67936 248 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 SLC30A10Q6XR72 485 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 C12orf42Q96LP6 360 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 C19orf81C9J6K1 198 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 KLRC4O43908 158 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 HSD17B4P51659 736 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 STX17P56962 302 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 MAP3K9P80192 1104 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 MCM6Q14566 821 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 SLFN12Q8IYM2 578 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 TRIM9Q9C026 710 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 IFNKQ9P0W0 207 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 MAPK8IP1Q9UQF2 711 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 GDAQ9Y2T3 454 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 NFE2L3Q9Y4A8 694 aa23.71■■□□□ 1.39
PTPRF-207ENST00000436724 RLFQ13129 1914 aa23.7■■□□□ 1.39
PTPRF-207ENST00000436724 COBLO75128 1261 aa23.7■■□□□ 1.38
PTPRF-207ENST00000436724 SPIRE1Q08AE8 756 aa23.7■■□□□ 1.38
PTPRF-207ENST00000436724 MOB2Q70IA6 237 aa23.7■■□□□ 1.38
PTPRF-207ENST00000436724 MRFAP1L1Q96HT8 127 aa23.7■■□□□ 1.38
PTPRF-207ENST00000436724 CTDP1Q9Y5B0 961 aaPredicted RBP23.7■■□□□ 1.38
PTPRF-207ENST00000436724 PPP1R12BO60237 982 aaPredicted RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 ZBED4O75132 1171 aa23.69■■□□□ 1.38
PTPRF-207ENST00000436724 KMT5BQ4FZB7 885 aa23.69■■□□□ 1.38
PTPRF-207ENST00000436724 ENOX1Q8TC92 643 aaKnown RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 XPO4Q9C0E2 1151 aaKnown RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 MAGEF1Q9HAY2 307 aa23.69■■□□□ 1.38
PTPRF-207ENST00000436724 RIPK3Q9Y572 518 aa23.69■■□□□ 1.38
PTPRF-207ENST00000436724 OTOFQ9HC10 1997 aa23.69■■□□□ 1.38
PTPRF-207ENST00000436724 CCT6AP40227 531 aaKnown RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 NOLC1Q14978 699 aaKnown RBP eCLIP23.69■■□□□ 1.384e-9■■□□□ 13.3
PTPRF-207ENST00000436724 TMEM119Q4V9L6 283 aa23.69■■□□□ 1.38
PTPRF-207ENST00000436724 USP50Q70EL3 339 aaPredicted RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 LARP4BQ92615 738 aaKnown RBP23.69■■□□□ 1.38
PTPRF-207ENST00000436724 COL11A1P12107 1806 aaPredicted RBP23.68■■□□□ 1.38
PTPRF-207ENST00000436724 GLTPD2A6NH11 291 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 TBX3O15119 743 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 ERCC5P28715 1186 aaPredicted RBP23.68■■□□□ 1.38
PTPRF-207ENST00000436724 EAPPQ56P03 285 aaPredicted RBP23.68■■□□□ 1.38
PTPRF-207ENST00000436724 ZNF658Q5TYW1 1059 aaPredicted RBP23.68■■□□□ 1.38
PTPRF-207ENST00000436724 TEX2Q8IWB9 1127 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 RMND1Q9NWS8 449 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 TMOD4Q9NZQ9 345 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 MYL1P05976 194 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 FANCCQ00597 558 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 CDCA5Q96FF9 252 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 SAMSN1Q9NSI8 373 aaKnown RBP23.68■■□□□ 1.38
PTPRF-207ENST00000436724 STK17AQ9UEE5 414 aa23.68■■□□□ 1.38
PTPRF-207ENST00000436724 POTEB3A0JP26 581 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 POTECB2RU33 542 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 NCAPH2Q6IBW4 605 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 POTEBQ6S5H4 581 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 SV2BQ7L1I2 683 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 RAD54LQ92698 747 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CLMNQ96JQ2 1002 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 TRERF1Q96PN7 1200 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CTNND2Q9UQB3 1225 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CSADQ9Y600 493 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 PTGS1P23219 599 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CDC25BP30305 580 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 DSG3P32926 999 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 ASIC1P78348 528 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CCDC144BQ3MJ40 725 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CATSPERGQ6ZRH7 1159 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 CCDC186Q7Z3E2 898 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 C17orf53Q8N3J3 647 aaPredicted RBP23.67■■□□□ 1.38
PTPRF-207ENST00000436724 FAM20AQ96MK3 541 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 C7orf25Q9BPX7 421 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 KCNF1Q9H3M0 494 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 KIAA1024Q9UPX6 916 aa23.67■■□□□ 1.38
PTPRF-207ENST00000436724 SYNRGQ9UMZ2 1314 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 WDR90Q96KV7 1748 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 PAPPA2Q9BXP8 1791 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 MYMKA6NI61 221 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 RRP9O43818 475 aaKnown RBP23.66■■□□□ 1.38
PTPRF-207ENST00000436724 MED24O75448 989 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 PRCPP42785 496 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 RPS6P62753 249 aaKnown RBP23.66■■□□□ 1.38
PTPRF-207ENST00000436724 COG2Q14746 738 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 MCF2L2Q86YR7 1114 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 REPS2Q8NFH8 660 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 IL31RAQ8NI17 732 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 ELP3Q9H9T3 547 aa23.66■■□□□ 1.38
PTPRF-207ENST00000436724 KCNB1Q14721 858 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 CEP55Q53EZ4 464 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 DYMQ7RTS9 669 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 PURBQ96QR8 312 aaKnown RBP23.65■■□□□ 1.38
PTPRF-207ENST00000436724 EHMT1Q9H9B1 1298 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 VAV3Q9UKW4 847 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 GOLGA6L6A8MZA4 724 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 E9PMD0 336 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 RHOBTB3O94955 611 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 AMPD3Q01432 767 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 HSP90AA2PQ14568 343 aaPredicted RBP23.65■■□□□ 1.38
PTPRF-207ENST00000436724 TREML2Q5T2D2 321 aa23.65■■□□□ 1.38
PTPRF-207ENST00000436724 SYTL5Q8TDW5 730 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms