RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 TRAPPC10P48553 1259 aa18.81■□□□□ 0.6
CTDSPL-204ENST00000435525 SETQ01105 290 aaPredicted RBP18.81■□□□□ 0.6
CTDSPL-204ENST00000435525 INF2Q27J81 1249 aa18.81■□□□□ 0.6
CTDSPL-204ENST00000435525 HMX1Q9NP08 348 aaPredicted RBP18.81■□□□□ 0.6
CTDSPL-204ENST00000435525 FAM184BQ9ULE4 1060 aa18.81■□□□□ 0.6
CTDSPL-204ENST00000435525 ASTN1O14525 1302 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 MSCO60682 206 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 SNAI1O95863 264 aaPredicted RBP18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 CACNB2Q08289 660 aaPredicted RBP18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 TTLL4Q14679 1199 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 LETM2Q2VYF4 491 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 CEP55Q53EZ4 464 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 IQSEC1Q6DN90 963 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 MOXD1Q6UVY6 613 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 SEPT14Q6ZU15 432 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 EEPD1Q7L9B9 569 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 NIPA1Q7RTP0 329 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 GPRASP2Q96D09 838 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 IPO9Q96P70 1041 aaKnown RBP18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 TCEAL9Q9UHQ7 104 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 MRVI1Q9Y6F6 885 aa18.8■□□□□ 0.6
CTDSPL-204ENST00000435525 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 FIBPO43427 364 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 MARCH6O60337 910 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 TGFB3P10600 412 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 AKR1A1P14550 325 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 NUCB2P80303 420 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 ORC2Q13416 577 aaPredicted RBP18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 MTMR1Q13613 665 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 RILPL1Q5EBL4 403 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 IL31RAQ8NI17 732 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 SH3TC2Q8TF17 1288 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 TNFRSF25Q93038 417 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 INPP4AQ96PE3 977 aaPredicted RBP18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 MXRA8Q9BRK3 442 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 MCOLN1Q9GZU1 580 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 RTEL1Q9NZ71 1219 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 MTMR6Q9Y217 621 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 ATP6V1DQ9Y5K8 247 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 UBIAD1Q9Y5Z9 338 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 MGAMO43451 1857 aa18.79■□□□□ 0.6
CTDSPL-204ENST00000435525 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.63e-7■■■■□ 20.6
CTDSPL-204ENST00000435525 CCNT1O60563 726 aaKnown RBP18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 ZSCAN22P10073 491 aaPredicted RBP18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 CYBAP13498 195 aa18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 CIITAP33076 1130 aa18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 PLA2G4DQ86XP0 818 aa18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 GIMAP8Q8ND71 665 aaPredicted RBP18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 JADE2Q9NQC1 790 aa18.78■□□□□ 0.6
CTDSPL-204ENST00000435525 ADAMTS3O15072 1205 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 SEPT4O43236 478 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 BAG4O95429 457 aaKnown RBP18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 IGHA2P01877 340 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 ATP2B1P20020 1258 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 MRPS9P82933 396 aaKnown RBP18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 TNFAIP2Q03169 654 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 MAP3K21Q5TCX8 1036 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 PPP4R3AQ6IN85 833 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 ARMC5Q96C12 935 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 WDR11Q9BZH6 1224 aa18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 CIZ1Q9ULV3 898 aaPredicted RBP18.77■□□□□ 0.6
CTDSPL-204ENST00000435525 CASP8AP2Q9UKL3 1982 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 CYP3A7-CYP3A51PA0A087WV96 503 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 KIF28PB7ZC32 967 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 MEIS1O00470 390 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 ZNF865P0CJ78 1059 aaPredicted RBP18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 RARBP10826 455 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 CYP3A7P24462 503 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 ICAM3P32942 547 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 NEDD9Q14511 834 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 CCDC144BQ3MJ40 725 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 PRR16Q569H4 304 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 BRDTQ58F21 947 aaPredicted RBP18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 PRAMEF19Q5SWL8 479 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 CRYGNQ8WXF5 182 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 TMEM106CQ9BVX2 250 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 CEP131Q9UPN4 1083 aa18.76■□□□□ 0.59
CTDSPL-204ENST00000435525 ZSWIM8A7E2V4 1837 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 RBM47A0AV96 593 aaKnown RBP18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 SPATA31C2B4DYI2 1134 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 BMP15O95972 392 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 CAPN2P17655 700 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 TRIM32Q13049 653 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 Q4G0T1 1027 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 TTC38Q5R3I4 469 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 ZNF396Q96N95 335 aaPredicted RBP18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 SDF4Q9BRK5 362 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.75■□□□□ 0.596e-17■■□□□ 12.4
CTDSPL-204ENST00000435525 AP5M1Q9H0R1 490 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 RNF208Q9H0X6 261 aa18.75■□□□□ 0.59
CTDSPL-204ENST00000435525 F13A1P00488 732 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 GH1P01241 217 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 CCL5P13501 91 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 ITGB5P18084 799 aa18.74■□□□□ 0.59
CTDSPL-204ENST00000435525 ADCYAP1R1P41586 468 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms