RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 DPYDQ12882 1025 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SLC27A3Q5K4L6 730 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 TRAPPC3LQ5T215 181 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SPATA1Q5VX52 437 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 E4F1Q66K89 784 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SRBD1Q8N5C6 995 aaKnown RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 IQUBQ8NA54 791 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 CCDC12Q8WUD4 166 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SHISA4Q96DD7 197 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 ERO1AQ96HE7 468 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 C16orf45Q96MC5 204 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 GAS2L1Q99501 681 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 FEZ1Q99689 392 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SPZ1Q9BXG8 430 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 NAA15Q9BXJ9 866 aaKnown RBP8.42□□□□□ -1.06
COL17A1-204ENST00000433822 CSRNP2Q9H175 543 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 SERTAD1Q9UHV2 236 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 ITIH6Q6UXX5 1313 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 PHLPP2Q6ZVD8 1323 aa8.42□□□□□ -1.06
COL17A1-204ENST00000433822 GAKO14976 1311 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 FAM205AQ6ZU69 1335 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 GPR75-ASB3A0A0A6YYF3 556 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 A0A1B0GTH6 734 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 ESYT2A0FGR8 921 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 M0R2N6 131 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 OIP5O43482 229 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 SERPINC1P01008 464 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 HSPA1AP0DMV8 641 aaKnown RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 HSPA1BP0DMV9 641 aaKnown RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 TOP1P11387 765 aaKnown RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 RFC4P35249 363 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 POU4F2Q12837 409 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CUL4BQ13620 913 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 KCNB1Q14721 858 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 NFIXQ14938 502 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CDKAL1Q5VV42 579 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CNBD1Q8NA66 436 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 ERCC4Q92889 916 aaPredicted RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CCDC51Q96ER9 411 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 AK8Q96MA6 479 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 PANX2Q96RD6 677 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CRAMP1Q96RY5 1269 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CCDC94Q9BW85 323 aaPredicted RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CCSER1Q9C0I3 900 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 KAT14Q9H8E8 782 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 HMX1Q9NP08 348 aaPredicted RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 NMRK2Q9NPI5 230 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 FANCLQ9NW38 375 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 RMND1Q9NWS8 449 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 VPS54Q9P1Q0 977 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 CGNQ9P2M7 1197 aaKnown RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 SRP68Q9UHB9 627 aaKnown RBP8.41□□□□□ -1.06
COL17A1-204ENST00000433822 PCDHA4Q9UN74 947 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 NFE2L3Q9Y4A8 694 aa8.41□□□□□ -1.06
COL17A1-204ENST00000433822 NRXN2Q9P2S2 1712 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 PALM3A6NDB9 673 aaPredicted RBP8.4□□□□□ -1.06
COL17A1-204ENST00000433822 UBE2Q2LH0YL09 131 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 ZSCAN12O43309 604 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 TOMM70O94826 608 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 ATP1A3P13637 1013 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 KLRK1P26718 216 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 TXLNAP40222 546 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 PBX1P40424 430 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 USP5P45974 858 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 NLRP5P59047 1200 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 ETF1P62495 437 aaKnown RBP8.4□□□□□ -1.06
COL17A1-204ENST00000433822 GRIN1Q05586 938 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 TRIM14Q14142 442 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 NR1I3Q14994 352 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 SPECC1LQ69YQ0 1117 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 TMEM139Q8IV31 216 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 BLIDQ8IZY5 108 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 UBE2Q2Q8WVN8 375 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 PAGE5Q96GU1 130 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 PPP1R13BQ96KQ4 1090 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 RTFDC1Q9BY42 306 aaPredicted RBP8.4□□□□□ -1.06
COL17A1-204ENST00000433822 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.06
COL17A1-204ENST00000433822 SNED1Q8TER0 1413 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
COL17A1-204ENST00000433822 BRCA1P38398 1863 aaKnown RBP8.39□□□□□ -1.07
COL17A1-204ENST00000433822 A0A087WWV3 80 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 CYP2D7A0A087X1C5 515 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 SLC26A4O43511 780 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 RASA1P20936 1047 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 TUBB4BP68371 445 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 ST5P78524 1137 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 NCBP1Q09161 790 aaKnown RBP8.39□□□□□ -1.07
COL17A1-204ENST00000433822 TUBB2AQ13885 445 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 COBLL1Q53SF7 1204 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 CCDC93Q567U6 631 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 WDR44Q5JSH3 913 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 FOXR2Q6PJQ5 311 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 BICDL1Q6ZP65 573 aa8.39□□□□□ -1.07
COL17A1-204ENST00000433822 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms