RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 SPRED2Q7Z698 418 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 RPUSD2Q8IZ73 545 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 IL31RAQ8NI17 732 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 ARHGEF15O94989 841 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 GH1P01241 217 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 CYP21A2P08686 494 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 STXBP2Q15833 593 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 PTGISQ16647 500 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 KAT2BQ92831 832 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 PIGSQ96S52 555 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 PTPRSQ13332 1948 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 LOC102724159A0A0B4J2E5 919 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 CA3P07451 260 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 PWP2Q15269 919 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 KRT40Q6A162 431 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 STOX1Q6ZVD7 989 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 MCF2L2Q86YR7 1114 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 CTAGE1Q96RT6 745 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 BCAS3Q9H6U6 928 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
SMARCE1-205ENST00000431889 B4DLN1 442 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 NR3C2P08235 984 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 CHMLP26374 656 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 MRPL12P52815 198 aaKnown RBP16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 COL9A3Q14050 684 aaPredicted RBP16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 TCTN1Q2MV58 587 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 DHX38Q92620 1227 aaKnown RBP16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 DDX41Q9UJV9 622 aaKnown RBP16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
SMARCE1-205ENST00000431889 EPOPA6NHQ4 379 aa16.57■□□□□ 0.24
SMARCE1-205ENST00000431889 RGS20O76081 388 aa16.57■□□□□ 0.24
SMARCE1-205ENST00000431889 WNT8BQ93098 351 aa16.57■□□□□ 0.24
SMARCE1-205ENST00000431889 PALM3A6NDB9 673 aaPredicted RBP16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 ZBTB5O15062 677 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 CYTH3O43739 400 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 KPNA6O60684 536 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 SP2Q02086 613 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 TRDNQ13061 729 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 HIC1Q14526 733 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 GPNMBQ14956 572 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 SEZ6LQ9BYH1 1024 aa16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 TCF20Q9UGU0 1960 aaKnown RBP16.56■□□□□ 0.24
SMARCE1-205ENST00000431889 E7EWF7 191 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 CASTP20810 708 aaKnown RBP16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 PSEN2P49810 448 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 HSD17B4P51659 736 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 GRM4Q14833 912 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 PCDHA11Q9Y5I1 949 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 TRANK1O15050 2925 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 ANTXR2P58335 489 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 MFSD10Q14728 455 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 WTAPQ15007 396 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 PGM5Q15124 567 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 DGKDQ16760 1214 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 KIAA0753Q2KHM9 967 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 HSDL1Q3SXM5 330 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 CMTR1Q8N1G2 835 aaKnown RBP16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 C7orf31Q8N865 590 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 ARNTL2Q8WYA1 636 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
SMARCE1-205ENST00000431889 LCHNA4D1U4 455 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 GGPS1O95749 300 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 ACTN1P12814 892 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 RXRAP19793 462 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 DEFB103AP81534 67 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 TFF2Q03403 129 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 BFSP2Q13515 415 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 FAM117BQ6P1L5 589 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 SPATA33Q96N06 139 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
SMARCE1-205ENST00000431889 ERICH2A1L162 156 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms