RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 NOD1Q9Y239 953 aa17.83■□□□□ 0.44
RPL28-204ENST00000431533 ABCB11O95342 1321 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 RABGGTBP53611 331 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 TTLL4Q14679 1199 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 GRM4Q14833 912 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 NECTIN1Q15223 517 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 CCDC155Q8N6L0 562 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 UHRF1Q96T88 793 aaPredicted RBP17.82■□□□□ 0.44
RPL28-204ENST00000431533 MYL10Q9BUA6 226 aa17.82■□□□□ 0.44
RPL28-204ENST00000431533 PALM3A6NDB9 673 aaPredicted RBP17.81■□□□□ 0.44
RPL28-204ENST00000431533 CYP2C9P11712 490 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 MCM5P33992 734 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 NBPF20Q3BBV1 942 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 RNF20Q5VTR2 975 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 DEFB128Q7Z7B8 93 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 RGS22Q8NE09 1264 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 PIBF1Q8WXW3 757 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
RPL28-204ENST00000431533 A6NJR5 290 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 TXNP10599 105 aaKnown RBP17.8■□□□□ 0.44
RPL28-204ENST00000431533 COL9A1P20849 921 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 PTGS1P23219 599 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
RPL28-204ENST00000431533 SKIV2LQ15477 1246 aaKnown RBP17.8■□□□□ 0.44
RPL28-204ENST00000431533 TMEM63BQ5T3F8 832 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 ZNF654Q8IZM8 581 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 MICALL1Q8N3F8 863 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPL28-204ENST00000431533 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
RPL28-204ENST00000431533 CCDC69A6NI79 296 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 PARNO95453 639 aaKnown RBP17.79■□□□□ 0.44
RPL28-204ENST00000431533 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
RPL28-204ENST00000431533 POU3F3P20264 500 aaPredicted RBP17.79■□□□□ 0.44
RPL28-204ENST00000431533 TROAPQ12815 778 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 PIGSQ96S52 555 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 AMNQ9BXJ7 453 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
RPL28-204ENST00000431533 CDH23Q9H251 3354 aa17.79■□□□□ 0.44
RPL28-204ENST00000431533 GBF1Q92538 1859 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
RPL28-204ENST00000431533 CFBP00751 764 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 RXRAP19793 462 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 EDNRBP24530 442 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 KCNJ6P48051 423 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 SLC35G1Q2M3R5 365 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 MCF2L2Q86YR7 1114 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 CTCFLQ8NI51 663 aaPredicted RBP17.78■□□□□ 0.44
RPL28-204ENST00000431533 CAGE1Q8TC20 777 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 TMEM87BQ96K49 555 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
RPL28-204ENST00000431533 PRUNE2Q8WUY3 3088 aa17.78■□□□□ 0.44
RPL28-204ENST00000431533 NCOR1O75376 2440 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 ZBTB5O15062 677 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 PPP1R11O60927 126 aaPredicted RBP17.77■□□□□ 0.44
RPL28-204ENST00000431533 CA3P07451 260 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 MYOGP15173 224 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 AFAP1L1Q8TED9 768 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 NEK1Q96PY6 1258 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 COG5Q9UP83 839 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 PCDHA1Q9Y5I3 950 aa17.77■□□□□ 0.44
RPL28-204ENST00000431533 EYSQ5T1H1 3165 aa17.77■□□□□ 0.43
RPL28-204ENST00000431533 CYTH3O43739 400 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 DDAH1O94760 285 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 GH1P01241 217 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
RPL28-204ENST00000431533 PTGISQ16647 500 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 RASEFQ8IZ41 740 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 SYTL5Q8TDW5 730 aaPredicted RBP17.76■□□□□ 0.43
RPL28-204ENST00000431533 NSUN6Q8TEA1 469 aaKnown RBP17.76■□□□□ 0.43
RPL28-204ENST00000431533 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 TCEANC2Q96MN5 208 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 IWS1Q96ST2 819 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 C1QTNF1Q9BXJ1 281 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 RIOX1Q9H6W3 641 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 SCN10AQ9Y5Y9 1956 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 VCANP13611 3396 aa17.76■□□□□ 0.43
RPL28-204ENST00000431533 KIF5BP33176 963 aa17.75■□□□□ 0.43
RPL28-204ENST00000431533 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
RPL28-204ENST00000431533 STXBP2Q15833 593 aa17.75■□□□□ 0.43
RPL28-204ENST00000431533 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
RPL28-204ENST00000431533 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
RPL28-204ENST00000431533 PLEKHA8P1O95397 391 aa17.74■□□□□ 0.43
RPL28-204ENST00000431533 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
RPL28-204ENST00000431533 LIFRP42702 1097 aa17.74■□□□□ 0.43
RPL28-204ENST00000431533 ADCK5Q3MIX3 580 aa17.74■□□□□ 0.43
RPL28-204ENST00000431533 ARHGEF16Q5VV41 709 aa17.74■□□□□ 0.43
RPL28-204ENST00000431533 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
RPL28-204ENST00000431533 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
RPL28-204ENST00000431533 TMTC2Q8N394 836 aa17.74■□□□□ 0.43
RPL28-204ENST00000431533 VWCEQ96DN2 955 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms