RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MTMR8Q96EF0 704 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 KATNAL1Q9BW62 490 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 IL25Q9H293 177 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 VAT1LQ9HCJ6 419 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 PXMP2Q9NR77 195 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 VCANP13611 3396 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 MYH7BA7E2Y1 1941 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 BAIAP3O94812 1187 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 PARNO95453 639 aaKnown RBP17.32■□□□□ 0.36
MSH5-208ENST00000429846 NR3C2P08235 984 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
MSH5-208ENST00000429846 RABGGTBP53611 331 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 ADGRE1Q14246 886 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 PTGISQ16647 500 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 STAG2Q8N3U4 1231 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 AFAP1L1Q8TED9 768 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 ATXN2LQ8WWM7 1075 aaKnown RBP17.32■□□□□ 0.36
MSH5-208ENST00000429846 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 MAD2L2Q9UI95 211 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
MSH5-208ENST00000429846 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
MSH5-208ENST00000429846 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
MSH5-208ENST00000429846 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
MSH5-208ENST00000429846 OPLAHO14841 1288 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 IGFBP4P22692 258 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 RBL2Q08999 1139 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 KCNV1Q6PIU1 500 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 PPTC7Q8NI37 304 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
MSH5-208ENST00000429846 TET1Q8NFU7 2136 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 ERICH2A1L162 156 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 LAMC2Q13753 1193 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 SART3Q15020 963 aaKnown RBP17.3■□□□□ 0.36
MSH5-208ENST00000429846 STOX1Q6ZVD7 989 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 CYB5R4Q7L1T6 521 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 KAT2BQ92831 832 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 PDCD2LQ9BRP1 358 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 FTOQ9C0B1 505 aaKnown RBP eCLIP17.3■□□□□ 0.36
MSH5-208ENST00000429846 GTF2IRD1Q9UHL9 959 aa17.3■□□□□ 0.36
MSH5-208ENST00000429846 SPTBN5Q9NRC6 3674 aaKnown RBP17.29■□□□□ 0.36
MSH5-208ENST00000429846 F2P00734 622 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 CYP21A2P08686 494 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 PDE4AP27815 886 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 CHMP4BP1P59074 171 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 GRM4Q14833 912 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 GDF6Q6KF10 455 aaPredicted RBP17.29■□□□□ 0.36
MSH5-208ENST00000429846 RALYLQ86SE5 291 aaKnown RBP17.29■□□□□ 0.36
MSH5-208ENST00000429846 C7orf31Q8N865 590 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 PPP1R13LQ8WUF5 828 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
MSH5-208ENST00000429846 PTPRSQ13332 1948 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
MSH5-208ENST00000429846 CA3P07451 260 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 TGFB3P10600 412 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 HOXD8P13378 290 aaPredicted RBP17.28■□□□□ 0.36
MSH5-208ENST00000429846 MYOGP15173 224 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 SELPP16109 830 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 KCNJ6P48051 423 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 PGM5Q15124 567 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 LRRC8DQ7L1W4 858 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
MSH5-208ENST00000429846 NCOA7Q8NI08 942 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 TSPYL2Q9H2G4 693 aaPredicted RBP17.28■□□□□ 0.36
MSH5-208ENST00000429846 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
MSH5-208ENST00000429846 CHD7Q9P2D1 2997 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 HAS3O00219 553 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
MSH5-208ENST00000429846 RGS20O76081 388 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 CHMLP26374 656 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 PSEN2P49810 448 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 MFSD10Q14728 455 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 WTAPQ15007 396 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 HOMER1Q86YM7 354 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 HERC6Q8IVU3 1022 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.36
MSH5-208ENST00000429846 BAZ2BQ9UIF8 2168 aaKnown RBP17.27■□□□□ 0.36
MSH5-208ENST00000429846 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
MSH5-208ENST00000429846 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 MYCLP12524 364 aaPredicted RBP17.26■□□□□ 0.35
MSH5-208ENST00000429846 POU3F3P20264 500 aaPredicted RBP17.26■□□□□ 0.35
MSH5-208ENST00000429846 CCND2P30279 289 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 MRPS5P82675 430 aaKnown RBP17.26■□□□□ 0.35
MSH5-208ENST00000429846 TROAPQ12815 778 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 PTK7Q13308 1070 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 CNKSR3Q6P9H4 555 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 DHX38Q92620 1227 aaKnown RBP17.26■□□□□ 0.35
MSH5-208ENST00000429846 ASB2Q96Q27 587 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 PIGSQ96S52 555 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
MSH5-208ENST00000429846 PNMA6FA0A0J9YX94 578 aa17.25■□□□□ 0.35
MSH5-208ENST00000429846 E7EWF7 191 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms