RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 OSBPL9Q96SU4 736 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 KLK7P49862 253 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 MTMR3Q13615 1198 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 EMBQ6PCB8 327 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 RSRC2Q7L4I2 434 aaKnown RBP13.88□□□□□ -0.19
CPNE4-201ENST00000429747 CCDC50Q8IVM0 306 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 TPH2Q8IWU9 490 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 DDX12PQ92771 950 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 BICD1Q96G01 975 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 LRRC1Q9BTT6 524 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 SMARCAL1Q9NZC9 954 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 XDHP47989 1333 aa13.88□□□□□ -0.19
CPNE4-201ENST00000429747 STK4Q13043 487 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 EARS2Q5JPH6 523 aaKnown RBP13.87□□□□□ -0.19
CPNE4-201ENST00000429747 ELOA2Q8IYF1 753 aaPredicted RBP13.87□□□□□ -0.19
CPNE4-201ENST00000429747 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 SRP68Q9UHB9 627 aaKnown RBP13.87□□□□□ -0.19
CPNE4-201ENST00000429747 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 PALMO75781 387 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
CPNE4-201ENST00000429747 HOOK3Q86VS8 718 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 AP1M1Q9BXS5 423 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 TMEM60Q9H2L4 133 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 A0A0U1RQJ8 604 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 TROAPQ12815 778 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 TRIM9Q9C026 710 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 USP40Q9NVE5 1235 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 TMEM260Q9NX78 707 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 L1RE1Q9UN81 338 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 PCDHA1Q9Y5I3 950 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 FAM169AQ9Y6X4 670 aa13.87□□□□□ -0.19
CPNE4-201ENST00000429747 MEIS1O00470 390 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 SCNN1DP51172 638 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 DDX39AO00148 427 aaKnown RBP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 CFBP00751 764 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 NR1D1P20393 614 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 CDK8P49336 464 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 APBA1Q02410 837 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 ALS2CLQ60I27 953 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 UNC13DQ70J99 1090 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 KCTD1Q719H9 257 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 GSTA5Q7RTV2 222 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 CACNA2D3Q8IZS8 1091 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 ZRANB2O95218 330 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 SERPING1P05155 500 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 TADA2BQ86TJ2 420 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 MGARPQ8TDB4 240 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 HNRNPLLQ8WVV9 542 aaKnown RBP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 CCDC77Q9BR77 488 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 BAIAP2L1Q9UHR4 511 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 UBL4BQ8N7F7 174 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
CPNE4-201ENST00000429747 KCND1Q9NSA2 647 aa13.86□□□□□ -0.19
CPNE4-201ENST00000429747 A0A087X0B3 334 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 CLIC2O15247 247 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 SRGNP10124 158 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 KCNB1Q14721 858 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 ZYXQ15942 572 aaKnown RBP13.85□□□□□ -0.19
CPNE4-201ENST00000429747 ANKZF1Q9H8Y5 726 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 SNX12Q9UMY4 172 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 DUSP10Q9Y6W6 482 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 CNTNAP5Q8WYK1 1306 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 RGS16O15492 202 aaPredicted RBP13.85□□□□□ -0.19
CPNE4-201ENST00000429747 ORC4O43929 436 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 SARSP49591 514 aaKnown RBP13.85□□□□□ -0.19
CPNE4-201ENST00000429747 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 KIFC2Q96AC6 838 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 RAB17Q9H0T7 212 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 BARHL2Q9NY43 387 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 ASIC3Q9UHC3 531 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 PLCB3Q01970 1234 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 CDKAL1Q5VV42 579 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 TBC1D22AQ8WUA7 517 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 NSUN4Q96CB9 384 aaKnown RBP13.85□□□□□ -0.19
CPNE4-201ENST00000429747 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 RNF14Q9UBS8 474 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
CPNE4-201ENST00000429747 MAP2K2P36507 400 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 CCNI2Q6ZMN8 369 aaPredicted RBP13.84□□□□□ -0.19
CPNE4-201ENST00000429747 ATP8A1Q9Y2Q0 1164 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 LRRIQ3A6PVS8 624 aaPredicted RBP13.84□□□□□ -0.19
CPNE4-201ENST00000429747 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
CPNE4-201ENST00000429747 PGRMC1O00264 195 aaKnown RBP13.84□□□□□ -0.19
CPNE4-201ENST00000429747 NAA25Q14CX7 972 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms