RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CCDC183Q5T5S1 534 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
SMC6-204ENST00000428868 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 GAS2L3Q86XJ1 694 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 MCF2L2Q86YR7 1114 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 PDILTQ8N807 584 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 MB21D1Q8N884 522 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
SMC6-204ENST00000428868 ETNPPLQ8TBG4 499 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 NUP62CLQ9H1M0 184 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 PORCNQ9H237 461 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 KCNMB3Q9NPA1 279 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
SMC6-204ENST00000428868 DDX19AQ9NUU7 478 aaKnown RBP10.06□□□□□ -0.8
SMC6-204ENST00000428868 MSH4O15457 936 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ZNF202O95125 648 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 PRR29P0C7W0 189 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ARP10275 920 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 PRPHP41219 470 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ERVK-9P63128 1117 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ERVK-24P63145 666 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ORC2Q13416 577 aaPredicted RBP10.05□□□□□ -0.8
SMC6-204ENST00000428868 KARSQ15046 597 aaKnown RBP10.05□□□□□ -0.8
SMC6-204ENST00000428868 PGM5Q15124 567 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 LONRF3Q496Y0 759 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 Q4G0T1 1027 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 CYP4F22Q6NT55 531 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 DTHD1Q6ZMT9 781 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 GRAMD1CQ8IYS0 662 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ANKRD13CQ8N6S4 541 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 FGD4Q96M96 766 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 NUDT12Q9BQG2 462 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
SMC6-204ENST00000428868 EFCC1Q9HA90 598 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 SERTAD1Q9UHV2 236 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 KCNH3Q9ULD8 1083 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 ABT1Q9ULW3 272 aaKnown RBP10.05□□□□□ -0.8
SMC6-204ENST00000428868 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 RABGAP1Q9Y3P9 1069 aa10.05□□□□□ -0.8
SMC6-204ENST00000428868 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 LAD1O00515 517 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 POLR2DO15514 142 aaKnown RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 MYCLP12524 364 aaPredicted RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 ITGB5P18084 799 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 ZNF76P36508 570 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 SYKP43405 635 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■□□□□ 8.7
SMC6-204ENST00000428868 SPIRE1Q08AE8 756 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 GRM1Q13255 1194 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 E2F4Q16254 413 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 MCTP2Q6DN12 878 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 PLA2G4DQ86XP0 818 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 IGSF22Q8N9C0 903 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 CHST13Q8NET6 341 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
SMC6-204ENST00000428868 DHX58Q96C10 678 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 RMDN3Q96TC7 470 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 PLIN2Q99541 437 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 WDR11Q9BZH6 1224 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 PKD2L1Q9P0L9 805 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 PNMA2Q9UL42 364 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 UBIAD1Q9Y5Z9 338 aa10.04□□□□□ -0.8
SMC6-204ENST00000428868 KINO60870 393 aaKnown RBP10.03□□□□□ -0.8
SMC6-204ENST00000428868 AOC2O75106 756 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 RGS20O76081 388 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 PGK2P07205 417 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 CASP1P29466 404 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 ZNF445P59923 1031 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 ECM1Q16610 540 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 ARHGEF16Q5VV41 709 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 PCNX4Q63HM2 1172 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 RBM43Q6ZSC3 357 aaKnown RBP10.03□□□□□ -0.8
SMC6-204ENST00000428868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMC6-204ENST00000428868 TEX2Q8IWB9 1127 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 ANKRD35Q8N283 1001 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 PNMA5Q96PV4 448 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 MXRA8Q9BRK3 442 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 FUCA2Q9BTY2 467 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 TNMDQ9H2S6 317 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 TTC12Q9H892 705 aaPredicted RBP10.03□□□□□ -0.8
SMC6-204ENST00000428868 EHMT1Q9H9B1 1298 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 MAP3K20Q9NYL2 800 aaKnown RBP10.03□□□□□ -0.8
SMC6-204ENST00000428868 MORF4L1Q9UBU8 362 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 CPA4Q9UI42 421 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 VAV3Q9UKW4 847 aa10.03□□□□□ -0.8
SMC6-204ENST00000428868 CASP8AP2Q9UKL3 1982 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms