RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 ZMYND12Q9H0C1 365 aa9.79□□□□□ -0.84
CDH13-202ENST00000428848 DMGDHQ9UI17 866 aaKnown RBP9.79□□□□□ -0.84
CDH13-202ENST00000428848 PCDHA13Q9Y5I0 950 aa9.79□□□□□ -0.84
CDH13-202ENST00000428848 IRS2Q9Y4H2 1338 aa9.79□□□□□ -0.84
CDH13-202ENST00000428848 TACC1O75410 805 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 OR52Z1P0C646 297 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 USP17L8P0C7I0 530 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 MTIF2P46199 727 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 ASTE1Q2TB18 679 aaPredicted RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 SPATA4Q8NEY3 305 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 RASSF8Q8NHQ8 419 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 CAGE1Q8TC20 777 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 SMCR8Q8TEV9 937 aaPredicted RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 HDAC7Q8WUI4 952 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 KAT2BQ92831 832 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 CCDC47Q96A33 483 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 CCDC42Q96M95 316 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 GDAP1L1Q96MZ0 367 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 LRRC1Q9BTT6 524 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 JADE2Q9NQC1 790 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 CDK5RAP2Q96SN8 1893 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 NAV1Q8NEY1 1877 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 EBAG9O00559 213 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 EPHB6O15197 1021 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 USO1O60763 962 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 LDHCP07864 332 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 EPB41P11171 864 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 TCP1P17987 556 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 SPA17Q15506 151 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 EZH2Q15910 746 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 VWA3BQ502W6 1294 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 FKBP15Q5T1M5 1219 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 CNNM4Q6P4Q7 775 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 KCNV1Q6PIU1 500 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 FAM43BQ6ZT52 329 aaPredicted RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 ZNF804AQ7Z570 1209 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 DZIP1Q86YF9 867 aaKnown RBP9.78□□□□□ -0.84
CDH13-202ENST00000428848 CNBD1Q8NA66 436 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 FAM76AQ8TAV0 307 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 OSBPL9Q96SU4 736 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 MLXIPQ9HAP2 919 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 TAF1LQ8IZX4 1826 aa9.78□□□□□ -0.84
CDH13-202ENST00000428848 GOLGA6BA6NDN3 693 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 ANKRD65E5RJM6 399 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 BAG3O95817 575 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 IRAK1P51617 712 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 KIF11P52732 1056 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 ASIC1P78348 528 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 DDR1Q08345 913 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 PPFIA1Q13136 1202 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 GRAPQ13588 217 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 HAUS3Q68CZ6 603 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 FOXR2Q6PJQ5 311 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 GRAPLQ8TC17 118 aaPredicted RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 BAP1Q92560 729 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 MCM9Q9NXL9 1143 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 ANKIB1Q9P2G1 1089 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 ATAD5Q96QE3 1844 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 GRIN2DO15399 1336 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 GOLGA6CA6NDK9 693 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 GOLGA8KD6RF30 607 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 MOCS3O95396 460 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 APBA3O96018 575 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 GOLGA6DP0CG33 693 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 EIF4A3P38919 411 aaKnown RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 AMPD3Q01432 767 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 MAN2A1Q16706 1144 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 CCDC70Q6NSX1 233 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 EMBQ6PCB8 327 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 SND1Q7KZF4 910 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDH13-202ENST00000428848 HEATR3Q7Z4Q2 680 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 RPGRQ92834 1020 aaKnown RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 CAVIN3Q969G5 261 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 DYNLL2Q96FJ2 89 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 LZTS2Q9BRK4 669 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 EDEM3Q9BZQ6 932 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 NDST4Q9H3R1 872 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 BLOC1S4Q9NUP1 217 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 GOLGA6AQ9NYA3 693 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.85
CDH13-202ENST00000428848 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 FAM169AQ9Y6X4 670 aa9.77□□□□□ -0.85
CDH13-202ENST00000428848 SBF2Q86WG5 1849 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 PVALEFA0A1B0GWK0 134 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 USP17L3A6NCW0 530 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 USP17L4A6NCW7 530 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
CDH13-202ENST00000428848 CALRP27797 417 aaKnown RBP9.76□□□□□ -0.85
CDH13-202ENST00000428848 HOXA7P31268 230 aaPredicted RBP9.76□□□□□ -0.85
CDH13-202ENST00000428848 EPHB4P54760 987 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms