RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RAB30Q15771 203 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 SLC35G1Q2M3R5 365 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 PIGSQ96S52 555 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 NKX2-4Q9H2Z4 354 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 MSRAQ9UJ68 235 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 NOD1Q9Y239 953 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 MRVI1Q9Y6F6 885 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 TMEM67Q5HYA8 995 aa19.83■□□□□ 0.77
TRIM39-209ENST00000428728 VWCEQ96DN2 955 aa19.83■□□□□ 0.77
TRIM39-209ENST00000428728 COL25A1Q9BXS0 654 aaPredicted RBP19.83■□□□□ 0.77
TRIM39-209ENST00000428728 PRDM12Q9H4Q4 367 aa19.83■□□□□ 0.77
TRIM39-209ENST00000428728 YBX2Q9Y2T7 364 aaKnown RBP19.83■□□□□ 0.77
TRIM39-209ENST00000428728 RBM8AQ9Y5S9 174 aaKnown RBP19.83■□□□□ 0.77
TRIM39-209ENST00000428728 SLC4A7Q9Y6M7 1214 aa19.83■□□□□ 0.77
TRIM39-209ENST00000428728 RABGGTBP53611 331 aa19.82■□□□□ 0.76
TRIM39-209ENST00000428728 ANTXR2P58335 489 aa19.82■□□□□ 0.76
TRIM39-209ENST00000428728 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
TRIM39-209ENST00000428728 IL31RAQ8NI17 732 aa19.82■□□□□ 0.76
TRIM39-209ENST00000428728 PIBF1Q8WXW3 757 aa19.82■□□□□ 0.76
TRIM39-209ENST00000428728 PDCD2LQ9BRP1 358 aa19.82■□□□□ 0.76
TRIM39-209ENST00000428728 DDX41Q9UJV9 622 aaKnown RBP19.82■□□□□ 0.76
TRIM39-209ENST00000428728 CYTH3O43739 400 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 SORBS3O60504 671 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 EIF3JO75822 258 aaKnown RBP19.81■□□□□ 0.76
TRIM39-209ENST00000428728 PFKMP08237 780 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 ZNF286BP0CG31 522 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
TRIM39-209ENST00000428728 GHRHRQ02643 423 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 PTGISQ16647 500 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 MB21D2Q8IYB1 491 aaPredicted RBP19.81■□□□□ 0.76
TRIM39-209ENST00000428728 USP38Q8NB14 1042 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 RETREG2Q8NC44 543 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 GAS2L1Q99501 681 aaPredicted RBP19.81■□□□□ 0.76
TRIM39-209ENST00000428728 RIOX1Q9H6W3 641 aa19.81■□□□□ 0.76
TRIM39-209ENST00000428728 PITPNM1O00562 1244 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 TROAPQ12815 778 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 PGM5Q15124 567 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 DGKDQ16760 1214 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 GDF6Q6KF10 455 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-209ENST00000428728 FCHSD1Q86WN1 690 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 KAT2BQ92831 832 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 MAP4K1Q92918 833 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 ZFP91Q96JP5 570 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-209ENST00000428728 MYL10Q9BUA6 226 aa19.8■□□□□ 0.76
TRIM39-209ENST00000428728 GCOM1H8Y6P7 765 aaPredicted RBP19.79■□□□□ 0.76
TRIM39-209ENST00000428728 IQCF3P0C7M6 154 aa19.79■□□□□ 0.76
TRIM39-209ENST00000428728 POLR2MP0CAP2 368 aa19.79■□□□□ 0.76
TRIM39-209ENST00000428728 MYOGP15173 224 aa19.79■□□□□ 0.76
TRIM39-209ENST00000428728 ATP2A2P16615 1042 aaKnown RBP19.79■□□□□ 0.76
TRIM39-209ENST00000428728 BFSP2Q13515 415 aa19.79■□□□□ 0.76
TRIM39-209ENST00000428728 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
TRIM39-209ENST00000428728 ALG1Q9BT22 464 aa19.79■□□□□ 0.76
TRIM39-209ENST00000428728 FTOQ9C0B1 505 aaKnown RBP eCLIP19.79■□□□□ 0.76
TRIM39-209ENST00000428728 SLC28A3Q9HAS3 691 aa19.79■□□□□ 0.76
TRIM39-209ENST00000428728 COL4A4P53420 1690 aaPredicted RBP19.78■□□□□ 0.76
TRIM39-209ENST00000428728 PNMA6FA0A0J9YX94 578 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 RGS20O76081 388 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 ACTN1P12814 892 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 CCND2P30279 289 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 RFC2P35250 354 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 PSEN2P49810 448 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 TRAF1Q13077 416 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 LAMC2Q13753 1193 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 ZNF654Q8IZM8 581 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 CCDC155Q8N6L0 562 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 PPTC7Q8NI37 304 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 IGDCC4Q8TDY8 1250 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 PPM1EQ8WY54 764 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 EMID1Q96A84 441 aaPredicted RBP19.78■□□□□ 0.76
TRIM39-209ENST00000428728 MAP3K20Q9NYL2 800 aaKnown RBP19.78■□□□□ 0.76
TRIM39-209ENST00000428728 CUL9Q8IWT3 2517 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 PRUNE2Q8WUY3 3088 aa19.78■□□□□ 0.76
TRIM39-209ENST00000428728 KAT6AQ92794 2004 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 GGPS1O95749 300 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 MFSD10Q14728 455 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 PPP2R2DQ66LE6 453 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 CASC1Q6TDU7 716 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 SESTD1Q86VW0 696 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 SAMD3Q8N6K7 520 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 CTCFLQ8NI51 663 aaPredicted RBP19.77■□□□□ 0.76
TRIM39-209ENST00000428728 CTAGE1Q96RT6 745 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 KATNAL1Q9BW62 490 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 LY9Q9HBG7 655 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 HDAC6Q9UBN7 1215 aa19.77■□□□□ 0.76
TRIM39-209ENST00000428728 PRC1O43663 620 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 F2P00734 622 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 UBA1P22314 1058 aaKnown RBP19.76■□□□□ 0.75
TRIM39-209ENST00000428728 IGFBP4P22692 258 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 KIAA0753Q2KHM9 967 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 VSIG10LQ86VR7 867 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 C7orf31Q8N865 590 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 CAGE1Q8TC20 777 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 GPKOWQ92917 476 aaPredicted RBP eCLIP19.76■□□□□ 0.75
TRIM39-209ENST00000428728 SPATA33Q96N06 139 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 LSG1Q9H089 658 aaKnown RBP19.76■□□□□ 0.75
TRIM39-209ENST00000428728 GTF2IRD1Q9UHL9 959 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 PCDHA11Q9Y5I1 949 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 MICAL3Q7RTP6 2002 aa19.76■□□□□ 0.75
TRIM39-209ENST00000428728 A0A0C4DFX4 3053 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms