RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 MSRAQ9UJ68 235 aa11.94□□□□□ -0.5
ZNF3-208ENST00000428683 RBM8AQ9Y5S9 174 aaKnown RBP11.94□□□□□ -0.5
ZNF3-208ENST00000428683 MRVI1Q9Y6F6 885 aa11.94□□□□□ -0.5
ZNF3-208ENST00000428683 COL6A3P12111 3177 aa11.94□□□□□ -0.5
ZNF3-208ENST00000428683 CYTH3O43739 400 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
ZNF3-208ENST00000428683 HSD17B4P51659 736 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 ANTXR2P58335 489 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 TROAPQ12815 778 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 SART3Q15020 963 aaKnown RBP11.93□□□□□ -0.5
ZNF3-208ENST00000428683 DHX37Q8IY37 1157 aaKnown RBP11.93□□□□□ -0.5
ZNF3-208ENST00000428683 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 PDCD2LQ9BRP1 358 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 FTOQ9C0B1 505 aaKnown RBP eCLIP11.93□□□□□ -0.5
ZNF3-208ENST00000428683 PRDM12Q9H4Q4 367 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 SLC4A7Q9Y6M7 1214 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 LRRC37A2A6NM11 1700 aa11.93□□□□□ -0.5
ZNF3-208ENST00000428683 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 GCOM1H8Y6P7 765 aaPredicted RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 RBAK-RBAKDNI3L0D1 243 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 IQCF3P0C7M6 154 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 POLR2MP0CAP2 368 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 MYOGP15173 224 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 PGM5Q15124 567 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 RAB30Q15771 203 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 PTGISQ16647 500 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 GDF6Q6KF10 455 aaPredicted RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 CATIPQ7Z7H3 387 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 SKAP1Q86WV1 359 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 KAT2BQ92831 832 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 MYL10Q9BUA6 226 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 COL25A1Q9BXS0 654 aaPredicted RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
ZNF3-208ENST00000428683 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 YBX2Q9Y2T7 364 aaKnown RBP11.92□□□□□ -0.5
ZNF3-208ENST00000428683 RGS20O76081 388 aa11.91□□□□□ -0.5
ZNF3-208ENST00000428683 DGKDQ16760 1214 aa11.91□□□□□ -0.5
ZNF3-208ENST00000428683 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
ZNF3-208ENST00000428683 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
ZNF3-208ENST00000428683 GPKOWQ92917 476 aaPredicted RBP eCLIP11.91□□□□□ -0.5
ZNF3-208ENST00000428683 GAS2L1Q99501 681 aaPredicted RBP11.91□□□□□ -0.5
ZNF3-208ENST00000428683 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
ZNF3-208ENST00000428683 LAMA2P24043 3122 aaKnown RBP11.91□□□□□ -0.5
ZNF3-208ENST00000428683 PRC1O43663 620 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 GGPS1O95749 300 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 ZNF286BP0CG31 522 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 ATP2A2P16615 1042 aaKnown RBP11.9□□□□□ -0.5
ZNF3-208ENST00000428683 RXRAP19793 462 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 IGFBP4P22692 258 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 CCND2P30279 289 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 PSEN2P49810 448 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 SP2Q02086 613 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 GHRHRQ02643 423 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 TRAF1Q13077 416 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 BFSP2Q13515 415 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
ZNF3-208ENST00000428683 CCDC85BQ15834 202 aaPredicted RBP11.9□□□□□ -0.5
ZNF3-208ENST00000428683 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 MYSM1Q5VVJ2 828 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 CMTR1Q8N1G2 835 aaKnown RBP11.9□□□□□ -0.5
ZNF3-208ENST00000428683 SAMD3Q8N6K7 520 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 C7orf31Q8N865 590 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 USP38Q8NB14 1042 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 CTCFLQ8NI51 663 aaPredicted RBP11.9□□□□□ -0.5
ZNF3-208ENST00000428683 SPATA33Q96N06 139 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 LSG1Q9H089 658 aaKnown RBP11.9□□□□□ -0.5
ZNF3-208ENST00000428683 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 MLXIPQ9HAP2 919 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 LY9Q9HBG7 655 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 RTEL1Q9NZ71 1219 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
ZNF3-208ENST00000428683 A0A0C4DFX4 3053 aa11.9□□□□□ -0.51
ZNF3-208ENST00000428683 CCDC69A6NI79 296 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 SLC27A2O14975 620 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 PFKMP08237 780 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 ACTN1P12814 892 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 RFC2P35250 354 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
ZNF3-208ENST00000428683 ADGRE1Q14246 886 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 MFSD10Q14728 455 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 KIAA0753Q2KHM9 967 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 CELF3Q5SZQ8 465 aaKnown RBP11.89□□□□□ -0.51
ZNF3-208ENST00000428683 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 EMID1Q96A84 441 aaPredicted RBP11.89□□□□□ -0.51
ZNF3-208ENST00000428683 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 LRRC2Q9BYS8 371 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
ZNF3-208ENST00000428683 PRDM6Q9NQX0 595 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms