RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 CASTP20810 708 aaKnown RBP17.52■□□□□ 0.4
PHF1-204ENST00000427826 CCND2P30279 289 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 CYP2C18P33260 490 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 ARHGAP1Q07960 439 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 LAMC2Q13753 1193 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 PGM5Q15124 567 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 NBPF20Q3BBV1 942 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 PSRC1Q6PGN9 363 aaPredicted RBP17.52■□□□□ 0.4
PHF1-204ENST00000427826 Q7L0L9 218 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 SGMS1Q86VZ5 419 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 FCHSD1Q86WN1 690 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 AFG1LQ8WV93 481 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 PIBF1Q8WXW3 757 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 EMID1Q96A84 441 aaPredicted RBP17.52■□□□□ 0.4
PHF1-204ENST00000427826 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
PHF1-204ENST00000427826 MYH6P13533 1939 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 STAM2O75886 525 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 HMGB1P09429 215 aaKnown RBP17.51■□□□□ 0.39
PHF1-204ENST00000427826 CSF2RAP15509 400 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 DGKDQ16760 1214 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 FAM47CQ5HY64 1035 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 CUL5Q93034 780 aa17.51■□□□□ 0.39
PHF1-204ENST00000427826 NOC4LQ9BVI4 516 aaKnown RBP17.51■□□□□ 0.39
PHF1-204ENST00000427826 MMP3P08254 477 aa17.5■□□□□ 0.39
PHF1-204ENST00000427826 TMEM240Q5SV17 173 aa17.5■□□□□ 0.39
PHF1-204ENST00000427826 ZNF697Q5TEC3 545 aa17.5■□□□□ 0.39
PHF1-204ENST00000427826 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
PHF1-204ENST00000427826 DHX37Q8IY37 1157 aaKnown RBP17.5■□□□□ 0.39
PHF1-204ENST00000427826 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
PHF1-204ENST00000427826 SRBD1Q8N5C6 995 aaKnown RBP17.5■□□□□ 0.39
PHF1-204ENST00000427826 PPTC7Q8NI37 304 aa17.5■□□□□ 0.39
PHF1-204ENST00000427826 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.394e-21■■■■□ 19.3
PHF1-204ENST00000427826 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
PHF1-204ENST00000427826 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
PHF1-204ENST00000427826 IL23AQ9NPF7 189 aa17.5■□□□□ 0.39
PHF1-204ENST00000427826 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.49■□□□□ 0.39
PHF1-204ENST00000427826 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.49■□□□□ 0.39
PHF1-204ENST00000427826 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 XRRA1Q6P2D8 792 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 C16orf59Q7L2K0 433 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 SMARCC2Q8TAQ2 1214 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
PHF1-204ENST00000427826 RBM28Q9NW13 759 aaKnown RBP17.49■□□□□ 0.39
PHF1-204ENST00000427826 STXBP5LQ9Y2K9 1186 aa17.49■□□□□ 0.39
PHF1-204ENST00000427826 PPFIA4O75335 1185 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 RGS20O76081 388 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 RXRAP19793 462 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 CCL23P55773 120 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 EXOSC10Q01780 885 aaKnown RBP17.48■□□□□ 0.39
PHF1-204ENST00000427826 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 ZNF365Q70YC5 407 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 MICU3Q86XE3 530 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 KATNAL1Q9BW62 490 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 NOD1Q9Y239 953 aa17.48■□□□□ 0.39
PHF1-204ENST00000427826 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
PHF1-204ENST00000427826 TMEM265A0A087WTH1 108 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 FGBP02675 491 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 ACRP10323 421 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 COL9A3Q14050 684 aaPredicted RBP17.47■□□□□ 0.39
PHF1-204ENST00000427826 CELF3Q5SZQ8 465 aaKnown RBP17.47■□□□□ 0.39
PHF1-204ENST00000427826 MYSM1Q5VVJ2 828 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
PHF1-204ENST00000427826 RETREG2Q8NC44 543 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 IL31RAQ8NI17 732 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
PHF1-204ENST00000427826 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
PHF1-204ENST00000427826 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 ZBTB43O43298 467 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 REC8O95072 547 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 GGPS1O95749 300 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 PFKMP08237 780 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 CYP2C9P11712 490 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 FGD1P98174 961 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 BFSP2Q13515 415 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 RASIP1Q5U651 963 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 SPATA33Q96N06 139 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 MLXIPQ9HAP2 919 aa17.46■□□□□ 0.39
PHF1-204ENST00000427826 UMODL1Q5DID0 1318 aa17.46■□□□□ 0.38
PHF1-204ENST00000427826 MEIS2O14770 477 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 HOXD8P13378 290 aaPredicted RBP17.45■□□□□ 0.38
PHF1-204ENST00000427826 ICAM3P32942 547 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 RFC2P35250 354 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 RCAN1P53805 252 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 NEDD9Q14511 834 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 PTGISQ16647 500 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 ADCK5Q3MIX3 580 aa17.45■□□□□ 0.38
PHF1-204ENST00000427826 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms