RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ATP6V1E2Q96A05 226 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ZMYND10O75800 440 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 PCCAP05165 728 aaPredicted RBP14.36□□□□□ -0.11
SPG11-202ENST00000427534 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
SPG11-202ENST00000427534 ATP11AP98196 1134 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 MECOMQ03112 1051 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 IVLP07476 585 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 HLFQ16534 295 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 PUS7LQ9H0K6 701 aaKnown RBP14.36□□□□□ -0.11
SPG11-202ENST00000427534 ARMCX3Q9UH62 379 aaPredicted RBP14.36□□□□□ -0.11
SPG11-202ENST00000427534 BAG2O95816 211 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 CXCR5P32302 372 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ELF1P32519 619 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 FAM83BQ5T0W9 1011 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 SYDE2Q5VT97 1194 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 PIGOQ8TEQ8 1089 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ARAP3Q8WWN8 1544 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 MLH3Q9UHC1 1453 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 AFF2P51816 1311 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 TFDP1Q14186 410 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 GBP6Q6ZN66 633 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ERO1AQ96HE7 468 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 WRNIP1Q96S55 665 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 ZWILCHQ9H900 591 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 HAUS2Q9NVX0 235 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 TMEM63CQ9P1W3 806 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
SPG11-202ENST00000427534 TYW5A2RUC4 315 aaKnown RBP14.36□□□□□ -0.11
SPG11-202ENST00000427534 PIK3R2O00459 728 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 CHRNA5P30532 468 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 PCK1P35558 622 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 R3HDM1Q15032 1099 aaKnown RBP14.35□□□□□ -0.11
SPG11-202ENST00000427534 ADCK5Q3MIX3 580 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 TTLL6Q8N841 843 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 IMPACTQ9P2X3 320 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 STK24Q9Y6E0 443 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 PFKFB2O60825 505 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 UPP2O95045 317 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 NUMBP49757 651 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 KRT71Q3SY84 523 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 PNMA8AQ86V59 439 aaPredicted RBP14.35□□□□□ -0.11
SPG11-202ENST00000427534 UNC5CLQ8IV45 518 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 PIGBQ92521 554 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 NCAPGQ9BPX3 1015 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 NUP58Q9BVL2 599 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 PDE8BO95263 885 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 SLC7A3Q8WY07 619 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 GH2P01242 217 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 IRX4P78413 519 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 SCN4BQ8IWT1 228 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 BMP3P12645 472 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 ERCC6LQ2NKX8 1250 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 OR6B2Q6IFH4 312 aa14.35□□□□□ -0.11
SPG11-202ENST00000427534 GABPB2Q8TAK5 448 aaPredicted RBP14.35□□□□□ -0.11
SPG11-202ENST00000427534 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 PDXDC2PQ6P474 469 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 ADCY9O60503 1353 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 MRPS25P82663 173 aaKnown RBP14.34□□□□□ -0.11
SPG11-202ENST00000427534 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 GLYCTKQ8IVS8 523 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 THNSL1Q8IYQ7 743 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 CPSF3Q9UKF6 684 aaKnown RBP14.34□□□□□ -0.11
SPG11-202ENST00000427534 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 ABCB11O95342 1321 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 NMT2O60551 498 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 CCDC94Q9BW85 323 aaPredicted RBP14.34□□□□□ -0.11
SPG11-202ENST00000427534 AMNQ9BXJ7 453 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 NR5A1Q13285 461 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 CFAP221Q4G0U5 840 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 FANCLQ9NW38 375 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 ERBB3P21860 1342 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 C1orf228Q6PIY5 440 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 SYCE1Q8N0S2 351 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 UBE2TQ9NPD8 197 aaPredicted RBP14.34□□□□□ -0.11
SPG11-202ENST00000427534 PIM2Q9P1W9 311 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 NSUN2Q08J23 767 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPG11-202ENST00000427534 CCDC157Q569K6 752 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 DNAAF3Q8N9W5 541 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 CALN1Q9BXU9 219 aa14.34□□□□□ -0.11
SPG11-202ENST00000427534 ANXA13P27216 316 aa14.33□□□□□ -0.11
SPG11-202ENST00000427534 ACRBPQ8NEB7 543 aa14.33□□□□□ -0.11
SPG11-202ENST00000427534 GFPT2O94808 682 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 NSFP46459 744 aaKnown RBP14.33□□□□□ -0.12
SPG11-202ENST00000427534 EPHB1P54762 984 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 AIFM3Q96NN9 605 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 CAPN15O75808 1086 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 CTNNA1P35221 906 aaKnown RBP14.33□□□□□ -0.12
SPG11-202ENST00000427534 EHHADHQ08426 723 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 CDC37Q16543 378 aaPredicted RBP14.33□□□□□ -0.12
SPG11-202ENST00000427534 ANGPTL8Q6UXH0 198 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 TAOK1Q7L7X3 1001 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 COPRSQ9NQ92 184 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 A0A0G2JLW4 131 aa14.33□□□□□ -0.12
SPG11-202ENST00000427534 STX2P32856 288 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms