RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 HAS3O00219 553 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 TLL1O43897 1013 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 LPXNO60711 386 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
COPS6-204ENST00000426712 ARHGEF15O94989 841 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 GH1P01241 217 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 CXCL10P02778 98 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 MMP3P08254 477 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 HOXD8P13378 290 aaPredicted RBP10.36□□□□□ -0.75
COPS6-204ENST00000426712 CASTP20810 708 aaKnown RBP10.36□□□□□ -0.75
COPS6-204ENST00000426712 TFF2Q03403 129 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 STXBP2Q15833 593 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 CDC37Q16543 378 aaPredicted RBP10.36□□□□□ -0.75
COPS6-204ENST00000426712 USH1GQ495M9 461 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 IQCA1Q86XH1 822 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 PLEKHM2Q8IWE5 1019 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 PNMA1Q8ND90 353 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 AFAP1L1Q8TED9 768 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 DHX38Q92620 1227 aaKnown RBP10.36□□□□□ -0.75
COPS6-204ENST00000426712 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 MTMR8Q96EF0 704 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 RMDN3Q96TC7 470 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 ZKSCAN3Q9BRR0 538 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
COPS6-204ENST00000426712 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
COPS6-204ENST00000426712 LMCD1Q9NZU5 365 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 COG5Q9UP83 839 aa10.36□□□□□ -0.75
COPS6-204ENST00000426712 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 OPLAHO14841 1288 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 GTPBP6O43824 516 aaPredicted RBP10.35□□□□□ -0.75
COPS6-204ENST00000426712 KDM4AO75164 1064 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 NR3C2P08235 984 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 CKBP12277 381 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 SELPP16109 830 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 HSD17B4P51659 736 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 DGKDQ16760 1214 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 ASPRV1Q53RT3 343 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 TRAF7Q6Q0C0 670 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 SEPT14Q6ZU15 432 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 CCDC155Q8N6L0 562 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 ENAHQ8N8S7 591 aaPredicted RBP10.35□□□□□ -0.75
COPS6-204ENST00000426712 ZSCAN10Q96SZ4 725 aaPredicted RBP10.35□□□□□ -0.75
COPS6-204ENST00000426712 DSCC1Q9BVC3 393 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 LNPKQ9C0E8 428 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 JMJD4Q9H9V9 463 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
COPS6-204ENST00000426712 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
COPS6-204ENST00000426712 ABHD14A-ACY1A0A1B0GW23 586 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 B4E1Z4 1266 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 NBNO60934 754 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 PPFIA4O75335 1185 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 RGS20O76081 388 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 KCNQ1P51787 676 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
COPS6-204ENST00000426712 PTK7Q13308 1070 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 GRB10Q13322 594 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 LAMC2Q13753 1193 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 TRIM71Q2Q1W2 868 aaKnown RBP10.34□□□□□ -0.75
COPS6-204ENST00000426712 QRICH1Q2TAL8 776 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 KRT40Q6A162 431 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 CNKSR3Q6P9H4 555 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 STOX1Q6ZVD7 989 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 FBXO11Q86XK2 927 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 PPTC7Q8NI37 304 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 ARNTL2Q8WYA1 636 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 KAT14Q9H8E8 782 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 CERS4Q9HA82 394 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 PXMP2Q9NR77 195 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 HDAC6Q9UBN7 1215 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 NOD1Q9Y239 953 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 LOXHD1Q8IVV2 1947 aa10.34□□□□□ -0.75
COPS6-204ENST00000426712 F2P00734 622 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 IGHDP01880 384 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 PARP1P09874 1014 aaKnown RBP10.33□□□□□ -0.76
COPS6-204ENST00000426712 TGFB3P10600 412 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 PSEN2P49810 448 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 ERVK-21P61565 698 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 NUCB1Q02818 461 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
COPS6-204ENST00000426712 SEC23AQ15436 765 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 TCTN1Q2MV58 587 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 ARHGEF16Q5VV41 709 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 MYSM1Q5VVJ2 828 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 KCNV1Q6PIU1 500 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
COPS6-204ENST00000426712 LRRC8DQ7L1W4 858 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 VSIG10LQ86VR7 867 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 CHD1LQ86WJ1 897 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 MICALL1Q8N3F8 863 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 IL27Q8NEV9 243 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 NECAB3Q96P71 396 aaPredicted RBP10.33□□□□□ -0.76
COPS6-204ENST00000426712 KATNAL1Q9BW62 490 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 KRT23Q9C075 422 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
COPS6-204ENST00000426712 RALGAPA2Q2PPJ7 1873 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 MYO7AQ13402 2215 aa10.33□□□□□ -0.76
COPS6-204ENST00000426712 ATG2AQ2TAZ0 1938 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms