RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 PTPN11Q06124 597 aaPredicted RBP23.24■■□□□ 1.31
CCDC107-206ENST00000426546 LY6KQ17RY6 165 aa23.24■■□□□ 1.31
CCDC107-206ENST00000426546 SLC35G1Q2M3R5 365 aa23.24■■□□□ 1.31
CCDC107-206ENST00000426546 CATIPQ7Z7H3 387 aa23.24■■□□□ 1.31
CCDC107-206ENST00000426546 HOMER1Q86YM7 354 aa23.24■■□□□ 1.31
CCDC107-206ENST00000426546 IGDCC4Q8TDY8 1250 aa23.24■■□□□ 1.31
CCDC107-206ENST00000426546 PPM1EQ8WY54 764 aa23.24■■□□□ 1.31
CCDC107-206ENST00000426546 MTIF3Q9H2K0 278 aaKnown RBP23.24■■□□□ 1.31
CCDC107-206ENST00000426546 TRMT13Q9NUP7 481 aaKnown RBP23.24■■□□□ 1.31
CCDC107-206ENST00000426546 FGBP02675 491 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 CCL23P55773 120 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 ARHGAP1Q07960 439 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 ADGRE1Q14246 886 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 RAB30Q15771 203 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 CHST3Q7LGC8 479 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 PIGSQ96S52 555 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 MAP3K14Q99558 947 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 GBF1Q92538 1859 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 TANC1Q9C0D5 1861 aa23.23■■□□□ 1.31
CCDC107-206ENST00000426546 MYH7BA7E2Y1 1941 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 PNMA6FA0A0J9YX94 578 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 CYTH3O43739 400 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 FAM47CQ5HY64 1035 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 RPUSD2Q8IZ73 545 aaKnown RBP23.22■■□□□ 1.31
CCDC107-206ENST00000426546 AFG1LQ8WV93 481 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 PDCD2LQ9BRP1 358 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 MSRAQ9UJ68 235 aa23.22■■□□□ 1.31
CCDC107-206ENST00000426546 CHD7Q9P2D1 2997 aa23.21■■□□□ 1.31
CCDC107-206ENST00000426546 TNFRSF10AO00220 468 aa23.21■■□□□ 1.31
CCDC107-206ENST00000426546 MMP3P08254 477 aa23.21■■□□□ 1.31
CCDC107-206ENST00000426546 CYP2C9P11712 490 aa23.21■■□□□ 1.31
CCDC107-206ENST00000426546 ATXN2LQ8WWM7 1075 aaKnown RBP23.21■■□□□ 1.31
CCDC107-206ENST00000426546 EMID1Q96A84 441 aaPredicted RBP23.21■■□□□ 1.31
CCDC107-206ENST00000426546 ESYT1Q9BSJ8 1104 aa23.21■■□□□ 1.31
CCDC107-206ENST00000426546 LSG1Q9H089 658 aaKnown RBP23.21■■□□□ 1.31
CCDC107-206ENST00000426546 NKX2-4Q9H2Z4 354 aa23.21■■□□□ 1.31
CCDC107-206ENST00000426546 DDX41Q9UJV9 622 aaKnown RBP23.21■■□□□ 1.31
CCDC107-206ENST00000426546 YBX2Q9Y2T7 364 aaKnown RBP23.21■■□□□ 1.31
CCDC107-206ENST00000426546 DDAH1O94760 285 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 PFKMP08237 780 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 HOXA13P31271 388 aaPredicted RBP23.2■■□□□ 1.3
CCDC107-206ENST00000426546 OTOP2Q7RTS6 562 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 LY9Q9HBG7 655 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 THEGQ9P2T0 379 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 MRVI1Q9Y6F6 885 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 SCN5AQ14524 2016 aa23.2■■□□□ 1.3
CCDC107-206ENST00000426546 GCOM1H8Y6P7 765 aaPredicted RBP23.19■■□□□ 1.3
CCDC107-206ENST00000426546 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 POLR2MP0CAP2 368 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 CASTP20810 708 aaKnown RBP23.19■■□□□ 1.3
CCDC107-206ENST00000426546 PGM5Q15124 567 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 KCNV1Q6PIU1 500 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 CASC1Q6TDU7 716 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 SESTD1Q86VW0 696 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 ZNF654Q8IZM8 581 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 SCLYQ96I15 445 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 SPZ1Q9BXG8 430 aa23.19■■□□□ 1.3
CCDC107-206ENST00000426546 PRC1O43663 620 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 RGS20O76081 388 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 KIF5BP33176 963 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 MCM5P33992 734 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 LAMC2Q13753 1193 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 DGKDQ16760 1214 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 VSIG10LQ86VR7 867 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 TMTC2Q8N394 836 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 PPTC7Q8NI37 304 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 CTCFLQ8NI51 663 aaPredicted RBP23.18■■□□□ 1.3
CCDC107-206ENST00000426546 VWCEQ96DN2 955 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 TMEM87BQ96K49 555 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 ASB2Q96Q27 587 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 SLC28A3Q9HAS3 691 aa23.18■■□□□ 1.3
CCDC107-206ENST00000426546 SLC27A2O14975 620 aa23.17■■□□□ 1.3
CCDC107-206ENST00000426546 MYCLP12524 364 aaPredicted RBP23.17■■□□□ 1.3
CCDC107-206ENST00000426546 IGFBP4P22692 258 aa23.17■■□□□ 1.3
CCDC107-206ENST00000426546 CCND2P30279 289 aa23.17■■□□□ 1.3
CCDC107-206ENST00000426546 CCDC85BQ15834 202 aaPredicted RBP23.17■■□□□ 1.3
CCDC107-206ENST00000426546 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
CCDC107-206ENST00000426546 CENPQQ7L2Z9 268 aaPredicted RBP23.17■■□□□ 1.3
CCDC107-206ENST00000426546 DHX37Q8IY37 1157 aaKnown RBP23.17■■□□□ 1.3
CCDC107-206ENST00000426546 KAT2BQ92831 832 aa23.17■■□□□ 1.3
CCDC107-206ENST00000426546 NOD1Q9Y239 953 aa23.17■■□□□ 1.3
CCDC107-206ENST00000426546 TGFB3P10600 412 aa23.16■■□□□ 1.3
CCDC107-206ENST00000426546 SMARCA1P28370 1054 aa23.16■■□□□ 1.3
CCDC107-206ENST00000426546 RFC2P35250 354 aa23.16■■□□□ 1.3
CCDC107-206ENST00000426546 BFSP2Q13515 415 aa23.16■■□□□ 1.3
CCDC107-206ENST00000426546 IL31RAQ8NI17 732 aa23.16■■□□□ 1.3
CCDC107-206ENST00000426546 PPP1R13LQ8WUF5 828 aa23.16■■□□□ 1.3
CCDC107-206ENST00000426546 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 TRIP12Q14669 1992 aaPredicted RBP23.15■■□□□ 1.3
CCDC107-206ENST00000426546 SH2B2O14492 632 aaPredicted RBP23.15■■□□□ 1.3
CCDC107-206ENST00000426546 HOXD8P13378 290 aaPredicted RBP23.15■■□□□ 1.3
CCDC107-206ENST00000426546 RABGGTBP53611 331 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 CHMP4BP1P59074 171 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 NECTIN1Q15223 517 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 CREB3L3Q68CJ9 461 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 FCHSD1Q86WN1 690 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 CCDC155Q8N6L0 562 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 RETREG2Q8NC44 543 aa23.15■■□□□ 1.3
CCDC107-206ENST00000426546 RRP36Q96EU6 259 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms