RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RNF40O75150 1001 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 ZRANB2O95218 330 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP42-203ENST00000426246 TDP2O95551 362 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 HPDP32754 393 aaPredicted RBP14.87□□□□□ -0.03
USP42-203ENST00000426246 USH1GQ495M9 461 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 DCAF17Q5H9S7 520 aaPredicted RBP14.87□□□□□ -0.03
USP42-203ENST00000426246 C12orf60Q5U649 245 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 TMEM47Q9BQJ4 181 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 CCDC151A5D8V7 595 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 RCCD1A6NED2 376 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 SMIM23A6NLE4 172 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 CYP4A11Q02928 519 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
USP42-203ENST00000426246 TBC1D22AQ8WUA7 517 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 HDAC7Q8WUI4 952 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 USP17L5A8MUK1 530 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 H0YIN7 160 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 BAG3O95817 575 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 MAGEA1P43355 309 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 GTF2IP78347 998 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 DOK7Q18PE1 504 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 ZNF622Q969S3 477 aaKnown RBP eCLIP14.86□□□□□ -0.03
USP42-203ENST00000426246 BMP15O95972 392 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 BTDP43251 543 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 PFKFB3Q16875 520 aaPredicted RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 NAA35Q5VZE5 725 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 KCNQ5Q9NR82 932 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 PCDHA4Q9UN74 947 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 BRCA1P38398 1863 aaKnown RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 NPHP3-ACAD11A0A0J9YXS1 232 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 H0YHG0 523 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 USO1O60763 962 aaKnown RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 EIF4A3P38919 411 aaKnown RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 GFPT1Q06210 699 aaPredicted RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 MAATS1Q7Z4T9 603 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 RRP36Q96EU6 259 aaKnown RBP14.86□□□□□ -0.03
USP42-203ENST00000426246 TSPYL1Q9H0U9 437 aa14.86□□□□□ -0.03
USP42-203ENST00000426246 BACH1O14867 736 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 CHMP2AO43633 222 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 KCNA3P22001 575 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 NONOQ15233 471 aaKnown RBP eCLIP14.85□□□□□ -0.03
USP42-203ENST00000426246 RDH13Q8NBN7 331 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 RWDD2AQ9UIY3 292 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 MYH6P13533 1939 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 BAG6P46379 1132 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 RCAN1P53805 252 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 UBXN2AP68543 259 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 FCHSD1Q86WN1 690 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
USP42-203ENST00000426246 ZC3H12CQ9C0D7 883 aaKnown RBP14.85□□□□□ -0.03
USP42-203ENST00000426246 HYOU1Q9Y4L1 999 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 SFI1A8K8P3 1242 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 ODF2Q5BJF6 829 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 SV2BQ7L1I2 683 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 COG1Q8WTW3 980 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 C6orf50Q9HD87 102 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 IL17RBQ9NRM6 502 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 DAGLAQ9Y4D2 1042 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 COL4A5P29400 1685 aa14.85□□□□□ -0.03
USP42-203ENST00000426246 ZSCAN5CA6NGD5 496 aaPredicted RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 OR52Z1P0C646 297 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 GGCXP38435 758 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 PAFAH1B1P43034 410 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 POLR2FP61218 127 aaKnown RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 ZYXQ15942 572 aaKnown RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 CALCRLQ16602 461 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 HERC4Q5GLZ8 1057 aaPredicted RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 REXO1Q8N1G1 1221 aaKnown RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 PCNTO95613 3336 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 SIPA1L1O43166 1804 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 H7C1D1 291 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 CYTH3O43739 400 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 TUBB4AP04350 444 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 KRT83P78385 493 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 BRD3Q15059 726 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 TTBK2Q6IQ55 1244 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 PCDHA6Q9UN73 950 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 PCDHA8Q9Y5H6 950 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 HGSO14964 777 aaPredicted RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 MYBL2P10244 700 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 CCT5P48643 541 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 EHHADHQ08426 723 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 BEND6Q5SZJ8 279 aaPredicted RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 RCSD1Q6JBY9 416 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 RSRC2Q7L4I2 434 aaKnown RBP14.84□□□□□ -0.03
USP42-203ENST00000426246 SH2D3CQ8N5H7 860 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 CEP95Q96GE4 821 aa14.84□□□□□ -0.03
USP42-203ENST00000426246 FLT1P17948 1338 aa14.83□□□□□ -0.03
USP42-203ENST00000426246 EPHB6O15197 1021 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 TACC1O75410 805 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 LDHCP07864 332 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 UHMK1Q8TAS1 419 aaKnown RBP14.83□□□□□ -0.04
USP42-203ENST00000426246 GBP3Q9H0R5 595 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L15C9J2P7 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L13C9JLJ4 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L11C9JVI0 530 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms