RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PSEN2P49810 448 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 KCNQ1P51787 676 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 GRB10Q13322 594 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PTPROQ16827 1216 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CCDC62Q6P9F0 684 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 SYTL5Q8TDW5 730 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ZKSCAN3Q9BRR0 538 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 AMNQ9BXJ7 453 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MLXIPQ9HAP2 919 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 GTF2IRD1Q9UHL9 959 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 FAM50BQ9Y247 325 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TGFB3P10600 412 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 GNAT1P11488 350 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CKBP12277 381 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TRDNQ13061 729 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MFSD10Q14728 455 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PUS10Q3MIT2 529 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 GDF6Q6KF10 455 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 SAMD11Q96NU1 681 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ZSCAN10Q96SZ4 725 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
HLA-DQB3-203ENST00000425319 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ERICH2A1L162 156 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 FOXP2O15409 715 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 KDM4AO75164 1064 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GJB5O95377 273 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 MYCLP12524 364 aaPredicted RBP14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 EIF2AK2P19525 551 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SDSP20132 328 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 PPTC7Q8NI37 304 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 EMID1Q96A84 441 aaPredicted RBP14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SPATA33Q96N06 139 aa14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 DDX41Q9UJV9 622 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RSPH10B2B2RC85 870 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ARIH2O95376 493 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CXCL10P02778 98 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RSPH10BP0C881 870 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ERVK-21P61565 698 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ARHGAP1Q07960 439 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RBL2Q08999 1139 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CSPP1Q1MSJ5 1256 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GNPTABQ3T906 1256 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 IFIT1BQ5T764 474 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ANKS1AQ92625 1134 aa14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 NECAB3Q96P71 396 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB3-203ENST00000425319 C17orf102A2RUQ5 167 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 LGR5O75473 907 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ALADP13716 330 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CCND2P30279 289 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 QRICH1Q2TAL8 776 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CWC27Q6UX04 472 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 FBXO22Q8NEZ5 403 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 PPP1R13LQ8WUF5 828 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SEPT8Q92599 483 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 VWCEQ96DN2 955 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 PXMP2Q9NR77 195 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ZSWIM5Q9P217 1185 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 MTUS1Q9ULD2 1270 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 PCDHA1Q9Y5I3 950 aa14.25□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SALL3Q9BXA9 1300 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 B4E1Z4 1266 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GCOM1H8Y6P7 765 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 GPR37L1O60883 481 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 POLR2MP0CAP2 368 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SSTR3P32745 418 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 THPOP40225 353 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SART3Q15020 963 aaKnown RBP14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 FAM117BQ6P1L5 589 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 KAT2BQ92831 832 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 LRFN3Q9BTN0 628 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 DSCC1Q9BVC3 393 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 SUGCTQ9HAC7 445 aa14.24□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ZBTB5O15062 677 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 NCK2O43639 380 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CAND2O75155 1236 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 STAM2O75886 525 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 F2P00734 622 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 RRP1P56182 461 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 NEDD9Q14511 834 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 CELF3Q5SZQ8 465 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ZNF618Q5T7W0 954 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 KRT40Q6A162 431 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 EP400NLQ6ZTU2 488 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 TBC1D10CQ8IV04 446 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
HLA-DQB3-203ENST00000425319 YME1L1Q96TA2 773 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms