RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PGBD1Q96JS3 809 aa29.05■■■□□ 2.24
TSPAN3-203ENST00000424443 WDR11Q9BZH6 1224 aa29.05■■■□□ 2.24
TSPAN3-203ENST00000424443 CRISPLD2Q9H0B8 497 aa29.05■■■□□ 2.24
TSPAN3-203ENST00000424443 XPNPEP3Q9NQH7 507 aa29.05■■■□□ 2.24
TSPAN3-203ENST00000424443 KCNJ14Q9UNX9 436 aa29.05■■■□□ 2.24
TSPAN3-203ENST00000424443 TTLL4Q14679 1199 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 BLIDQ8IZY5 108 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 SHISA4Q96DD7 197 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 SPC25Q9HBM1 224 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 OGDHLQ9ULD0 1010 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 KIF3AQ9Y496 699 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 DUSP11O75319 330 aaKnown RBP29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 MYCNP04198 464 aaPredicted RBP29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 GNPTABQ3T906 1256 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 PHF20Q9BVI0 1012 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 BRMS1Q9HCU9 246 aa29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.04■■■□□ 2.24
TSPAN3-203ENST00000424443 ARRDC4Q8NCT1 418 aa29.03■■■□□ 2.24
TSPAN3-203ENST00000424443 RBM47A0AV96 593 aaKnown RBP29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 TXNP10599 105 aaKnown RBP29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 FOSBP53539 338 aa29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 DAGLBQ8NCG7 672 aa29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 RASGRP4Q8TDF6 673 aa29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 LENG1Q96BZ8 264 aaPredicted RBP29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 ZFP91Q96JP5 570 aaPredicted RBP29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 GJB4Q9NTQ9 266 aa29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 RTEL1Q9NZ71 1219 aa29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 MRVI1Q9Y6F6 885 aa29.02■■■□□ 2.24
TSPAN3-203ENST00000424443 SMPD1P17405 629 aa29.01■■■□□ 2.23
TSPAN3-203ENST00000424443 DUSP28Q4G0W2 176 aa29.01■■■□□ 2.23
TSPAN3-203ENST00000424443 KCNV1Q6PIU1 500 aa29.01■■■□□ 2.23
TSPAN3-203ENST00000424443 ANKLE1Q8NAG6 615 aa29.01■■■□□ 2.23
TSPAN3-203ENST00000424443 AP5M1Q9H0R1 490 aa29.01■■■□□ 2.23
TSPAN3-203ENST00000424443 BRCA2P51587 3418 aa29■■■□□ 2.23
TSPAN3-203ENST00000424443 NKRFO15226 690 aaKnown RBP eCLIP29■■■□□ 2.232e-6■□□□□ 8.4
TSPAN3-203ENST00000424443 MRPS9P82933 396 aaKnown RBP29■■■□□ 2.23
TSPAN3-203ENST00000424443 RNF180Q86T96 592 aa29■■■□□ 2.23
TSPAN3-203ENST00000424443 NLRX1Q86UT6 975 aa29■■■□□ 2.23
TSPAN3-203ENST00000424443 C8orf76Q96K31 380 aa29■■■□□ 2.23
TSPAN3-203ENST00000424443 K7ELQ4 463 aaPredicted RBP28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 PGK1P00558 417 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 ZNF76P36508 570 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 SREBF1P36956 1147 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 FRMPD3Q5JV73 1810 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 HSCBQ8IWL3 235 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 SMC3Q9UQE7 1217 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 KIAA1217Q5T5P2 1943 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 SYNRGQ9UMZ2 1314 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 ADAMTS3O15072 1205 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 ADCY6O43306 1168 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 TLK2Q86UE8 772 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 SNX21Q969T3 373 aa28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 GNEQ9Y223 722 aaKnown RBP28.99■■■□□ 2.23
TSPAN3-203ENST00000424443 KBTBD13C9JR72 458 aa28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 DYNC1LI2O43237 492 aaPredicted RBP28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 C6orf222P0C671 652 aaPredicted RBP28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 KRT2P35908 639 aa28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 ARHGAP4P98171 946 aa28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 SAFBQ15424 915 aaKnown RBP eCLIP28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 INPP4AQ96PE3 977 aaPredicted RBP28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 Q9Y3F1 56 aa28.98■■■□□ 2.23
TSPAN3-203ENST00000424443 RGS20O76081 388 aa28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 FARP2O94887 1054 aaPredicted RBP28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 TGFB3P10600 412 aa28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 LY6KQ17RY6 165 aa28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 GJC2Q5T442 439 aaPredicted RBP28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 KRT40Q6A162 431 aa28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 KRT25Q7Z3Z0 450 aa28.97■■■□□ 2.23
TSPAN3-203ENST00000424443 CCDC194A0A1B0GVG4 234 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 FIBPO43427 364 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 ARIH2O95376 493 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 MMP1P03956 469 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 GJA9P57773 515 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 LRRC41Q15345 812 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 NPY5RQ15761 445 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 TMEM63BQ5T3F8 832 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 CCDC62Q6P9F0 684 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 OR6J1Q8NGC5 347 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 CDHR1Q96JP9 859 aa28.96■■■□□ 2.23
TSPAN3-203ENST00000424443 DNM1LO00429 736 aa28.95■■■□□ 2.23
TSPAN3-203ENST00000424443 GJB2P29033 226 aa28.95■■■□□ 2.23
TSPAN3-203ENST00000424443 CUL4AQ13619 759 aa28.95■■■□□ 2.23
TSPAN3-203ENST00000424443 GPRASP2Q96D09 838 aa28.95■■■□□ 2.23
TSPAN3-203ENST00000424443 DDX41Q9UJV9 622 aaKnown RBP28.95■■■□□ 2.23
TSPAN3-203ENST00000424443 M0R2N6 131 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 ADAMTS4O75173 837 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 GH1P01241 217 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 GUCY1B3Q02153 619 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 NONOQ15233 471 aaKnown RBP eCLIP28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 BRDTQ58F21 947 aaPredicted RBP28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 UPF3AQ9H1J1 476 aaKnown RBP28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 UBIAD1Q9Y5Z9 338 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 ICAM3P32942 547 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 MTMR1Q13613 665 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 CEP55Q53EZ4 464 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 GNASQ5JWF2 1037 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 NECAB2Q7Z6G3 386 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 TBCKQ8TEA7 893 aa28.94■■■□□ 2.22
TSPAN3-203ENST00000424443 COPS5Q92905 334 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms