RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 TRAPPC3O43617 180 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 RFC1P35251 1148 aaPredicted RBP12.02□□□□□ -0.49
SCN5A-205ENST00000423572 ZNF75DP51815 510 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 MCM6Q14566 821 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 TRIM48Q8IWZ4 208 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.02□□□□□ -0.49
SCN5A-205ENST00000423572 NXF1Q9UBU9 619 aaKnown RBP12.02□□□□□ -0.49
SCN5A-205ENST00000423572 IKBKBO14920 756 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 PRPF4O43172 522 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCN5A-205ENST00000423572 DNAJC6O75061 913 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 KLHL40Q2TBA0 621 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 KRT87PA6NCN2 255 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 USP17L21D6R901 530 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 SURF1Q15526 300 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 RFX6Q8HWS3 928 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 CACNA2D3Q8IZS8 1091 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
SCN5A-205ENST00000423572 FAM170AA1A519 330 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 CELF2O95319 508 aaKnown RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 MYL1P05976 194 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 TSC1Q92574 1164 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 HEXIM2Q96MH2 286 aaKnown RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 BAG1Q99933 345 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 EBAG9O00559 213 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 BMP3P12645 472 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 COPB2P35606 906 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 NSFP46459 744 aaKnown RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 PPP2R5EQ16537 467 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 PHKBQ93100 1093 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 KANSL2Q9H9L4 492 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 KLRF2D3W0D1 207 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 CREB3O43889 395 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 TADA2AO75478 443 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 KLC3Q6P597 504 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 VPS16Q9H269 839 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 TECP42680 631 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 RNF207Q6ZRF8 634 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 ZC3H4Q9UPT8 1303 aaKnown RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 HUNKP57058 714 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 NR1H3Q13133 447 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 EFCC1Q9HA90 598 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 HUS1O60921 280 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 CAPZA2P47755 286 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 SH3BGRP55822 239 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 RNF180Q86T96 592 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 SEPT8Q92599 483 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
SCN5A-205ENST00000423572 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
SCN5A-205ENST00000423572 SUPT3HB4E1H0 165 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 PAMP19021 973 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 MYL7Q01449 175 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 TTC19Q6DKK2 380 aaPredicted RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 HYOU1Q9Y4L1 999 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 TTC4O95801 387 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 KPNA2P52292 529 aaKnown RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 FCGRTP55899 365 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 CUL1Q13616 776 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 DENND2CQ68D51 928 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 SYNE4Q8N205 404 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 KATNAL1Q9BW62 490 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 EIF3CLB5ME19 914 aaKnown RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 PHKA2P46019 1235 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 VCPP55072 806 aaKnown RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 RUFY3Q7L099 469 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 OOSP2Q86WS3 158 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 LRGUKQ96M69 825 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 EIF3CQ99613 913 aaKnown RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 DCDC2CA8MYV0 355 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 NDUFB5O43674 189 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 DDX5P17844 614 aaKnown RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 SNAPC2Q13487 334 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 APOA4P06727 396 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 RALAP11233 206 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 CHRNDQ07001 517 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 WHAMMQ8TF30 809 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 TRIM62Q9BVG3 475 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 C6orf203Q9P0P8 240 aaPredicted RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 ATP10DQ9P241 1426 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 AKR1B15C9JRZ8 316 aaPredicted RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 PDE1AP54750 535 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 PHEXP78562 749 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 STXBP2Q15833 593 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 ZBTB38Q8NAP3 1195 aaPredicted RBP12□□□□□ -0.49
SCN5A-205ENST00000423572 SKA1Q96BD8 255 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 TNNQ9UQP3 1299 aa12□□□□□ -0.49
SCN5A-205ENST00000423572 ACADMP11310 421 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms