RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FRMPD3Q5JV73 1810 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 MKI67P46013 3256 aaKnown RBP12.6□□□□□ -0.39
USP49-204ENST00000423567 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 SEC24BO95487 1268 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
USP49-204ENST00000423567 CCND2P30279 289 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 PSEN1P49768 467 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 CPT1AP50416 773 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 NKX3-2P78367 333 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 BEX3Q00994 111 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 C1orf53Q5VUE5 145 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
USP49-204ENST00000423567 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
USP49-204ENST00000423567 OR6J1Q8NGC5 347 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 PDCD2LQ9BRP1 358 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 PSTPIP2Q9H939 334 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
USP49-204ENST00000423567 ELP1O95163 1332 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 CNTNAP5Q8WYK1 1306 aa12.6□□□□□ -0.39
USP49-204ENST00000423567 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 A0A0U1RQG5 324 aaPredicted RBP12.59□□□□□ -0.39
USP49-204ENST00000423567 hCG_1642624A0A1W2PR95 340 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 PIK3CDO00329 1044 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 SYN1P17600 705 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 ANAPC15P60006 121 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
USP49-204ENST00000423567 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
USP49-204ENST00000423567 SNX17Q15036 470 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 PGM5Q15124 567 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
USP49-204ENST00000423567 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
USP49-204ENST00000423567 SPDYE3A6NKU9 549 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 DCDC2CA8MYV0 355 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 PQBP1O60828 265 aaKnown RBP12.58□□□□□ -0.4
USP49-204ENST00000423567 GH1P01241 217 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 CDC27P30260 824 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 NAPAP54920 295 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 TLE2Q04725 743 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 GNPTABQ3T906 1256 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 VSIG10LQ86VR7 867 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
USP49-204ENST00000423567 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
USP49-204ENST00000423567 SEZ6LQ9BYH1 1024 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 UPF3BQ9BZI7 483 aaKnown RBP12.58□□□□□ -0.4
USP49-204ENST00000423567 GLT8D2Q9H1C3 349 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 EHMT1Q9H9B1 1298 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 PRDM5Q9NQX1 630 aaPredicted RBP12.58□□□□□ -0.4
USP49-204ENST00000423567 MCM3APO60318 1980 aa12.58□□□□□ -0.4
USP49-204ENST00000423567 LCTP09848 1927 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 MYH6P13533 1939 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 CPLX1O14810 134 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 CTAGE5O15320 804 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 KPNA6O60684 536 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 STAM2O75886 525 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 MYL3P08590 195 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 ADD1P35611 737 aaKnown RBP12.57□□□□□ -0.4
USP49-204ENST00000423567 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
USP49-204ENST00000423567 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 WWC2Q6AWC2 1192 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 XRRA1Q6P2D8 792 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 CPLX2Q6PUV4 134 aaKnown RBP12.57□□□□□ -0.4
USP49-204ENST00000423567 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 TEX2Q8IWB9 1127 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
USP49-204ENST00000423567 TOX2Q96NM4 488 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
USP49-204ENST00000423567 LRRC37A2A6NM11 1700 aa12.57□□□□□ -0.4
USP49-204ENST00000423567 NID2Q14112 1375 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 ARVCFO00192 962 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 MEIS2O14770 477 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
USP49-204ENST00000423567 ARIH2O95376 493 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 CLTBP09497 229 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 PTGS1P23219 599 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
USP49-204ENST00000423567 ADCY7P51828 1080 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 EVCP57679 992 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 FUT2Q10981 343 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 LAMC2Q13753 1193 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 TOB2Q14106 344 aaPredicted RBP12.56□□□□□ -0.4
USP49-204ENST00000423567 LY6KQ17RY6 165 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 TRIM22Q8IYM9 498 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 COPS5Q92905 334 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
USP49-204ENST00000423567 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
USP49-204ENST00000423567 DDX41Q9UJV9 622 aaKnown RBP12.56□□□□□ -0.4
USP49-204ENST00000423567 BAZ2BQ9UIF8 2168 aaKnown RBP12.56□□□□□ -0.4
USP49-204ENST00000423567 SMCO2A6NFE2 343 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 A6NJR5 290 aa12.55□□□□□ -0.4
USP49-204ENST00000423567 STXBP3O00186 592 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms