RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 PLEKHO1Q53GL0 409 aaPredicted RBP7.52□□□□□ -1.21
LINC00458-201ENST00000423442 CC2D1BQ5T0F9 858 aaKnown RBP7.52□□□□□ -1.21
LINC00458-201ENST00000423442 MEI1Q5TIA1 1274 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 OXR1Q8N573 874 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 KCPQ6ZWJ8 1503 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.21
LINC00458-201ENST00000423442 ITGB4P16144 1822 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 MMP10P09238 476 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 DPEP1P16444 411 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 GALK1P51570 392 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 TGFB2P61812 414 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 IRF2BP1Q8IU81 584 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 LILRA2Q8N149 483 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 FAM13CQ8NE31 585 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 CYB5D2Q8WUJ1 264 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 EBF1Q9UH73 591 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 KCNH3Q9ULD8 1083 aa7.51□□□□□ -1.21
LINC00458-201ENST00000423442 PKD1L3Q7Z443 1732 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 FITM1A5D6W6 292 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 PRPF40AO75400 957 aaKnown RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 HSP90AB1P08238 724 aaKnown RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 PLCG1P19174 1290 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 MTHFSP49914 203 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 EIF4A2Q14240 407 aaKnown RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 AMOTQ4VCS5 1084 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 C1orf141Q5JVX7 400 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 IFNL2Q8IZJ0 200 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 BAHD1Q8TBE0 780 aaPredicted RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 SMARCC1Q92922 1105 aaPredicted RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 INTS4Q96HW7 963 aaKnown RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 SGPP1Q9BX95 441 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 YBX2Q9Y2T7 364 aaKnown RBP7.5□□□□□ -1.21
LINC00458-201ENST00000423442 KDM2BQ8NHM5 1336 aa7.5□□□□□ -1.21
LINC00458-201ENST00000423442 BRCA1P38398 1863 aaKnown RBP7.49□□□□□ -1.21
LINC00458-201ENST00000423442 PLEKHG2Q9H7P9 1386 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 CYP27B1O15528 508 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 NR0B2Q15466 257 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 SMC1BQ8NDV3 1235 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 PIGBQ92521 554 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 CWC22Q9HCG8 908 aaKnown RBP7.49□□□□□ -1.21
LINC00458-201ENST00000423442 GPR160Q9UJ42 338 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 ANKRD26Q9UPS8 1709 aa7.49□□□□□ -1.21
LINC00458-201ENST00000423442 TNRC6CQ9HCJ0 1690 aaKnown RBP7.48□□□□□ -1.21
LINC00458-201ENST00000423442 ARFGEF1Q9Y6D6 1849 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 F6X3S4 739 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 DIAPH1O60610 1272 aaKnown RBP7.48□□□□□ -1.21
LINC00458-201ENST00000423442 BMP7P18075 431 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 KCNA3P22001 575 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 PDE6BP35913 854 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 ITPK1Q13572 414 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 SULT6B1Q6IMI4 303 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 BNC2Q6ZN30 1099 aaPredicted RBP7.48□□□□□ -1.21
LINC00458-201ENST00000423442 C10orf71Q711Q0 1435 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 RNF141Q8WVD5 230 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 DHX38Q92620 1227 aaKnown RBP7.48□□□□□ -1.21
LINC00458-201ENST00000423442 ZNF552Q9H707 407 aaPredicted RBP7.48□□□□□ -1.21
LINC00458-201ENST00000423442 GCM1Q9NP62 436 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 PARD6AQ9NPB6 346 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 TMOD3Q9NYL9 352 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 RNF181Q9P0P0 153 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 NUDCQ9Y266 331 aa7.48□□□□□ -1.21
LINC00458-201ENST00000423442 SBF1O95248 1867 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 PSPNO60542 156 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 PEX10O60683 326 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 TEKQ02763 1124 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 NLGN1Q8N2Q7 840 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 CNOT6Q9ULM6 557 aaKnown RBP7.47□□□□□ -1.21
LINC00458-201ENST00000423442 C4AP0C0L4 1744 aa7.47□□□□□ -1.21
LINC00458-201ENST00000423442 ERVV-2B6SEH9 535 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
LINC00458-201ENST00000423442 SEMA7AO75326 666 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.22
LINC00458-201ENST00000423442 TNNI2P48788 182 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 YARSP54577 528 aaKnown RBP7.46□□□□□ -1.22
LINC00458-201ENST00000423442 TMEM201Q5SNT2 666 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 ZNF530Q6P9A1 599 aaPredicted RBP7.46□□□□□ -1.22
LINC00458-201ENST00000423442 PHC3Q8NDX5 983 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 ZCCHC4Q9H5U6 513 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 ASAP1Q9ULH1 1129 aa7.46□□□□□ -1.22
LINC00458-201ENST00000423442 TEX51A0A1B0GUA7 166 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 CHURC1-FNTBB4DL54 471 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 EFEMP2O95967 443 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 PHKG2P15735 406 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 IL13P35225 146 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 DALRD3Q5D0E6 543 aaKnown RBP7.45□□□□□ -1.22
LINC00458-201ENST00000423442 SPPL2CQ8IUH8 684 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 SIRT2Q8IXJ6 389 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 RELTQ969Z4 430 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 KREMEN1Q96MU8 473 aa7.45□□□□□ -1.22
LINC00458-201ENST00000423442 A0A0G2JLL6 359 aaPredicted RBP7.44□□□□□ -1.22
LINC00458-201ENST00000423442 RBM47A0AV96 593 aaKnown RBP7.44□□□□□ -1.22
LINC00458-201ENST00000423442 FAM221AA4D161 298 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms