RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 EHMT1Q9H9B1 1298 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 NOD1Q9Y239 953 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 LAMA3Q16787 3333 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 LRRC37A2A6NM11 1700 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 SOX1O00570 391 aaPredicted RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 CYTH3O43739 400 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 B4GALT4O60513 344 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 PSMA5P28066 241 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 BFSP2Q13515 415 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 NEDD9Q14511 834 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 PGM5Q15124 567 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 LY6KQ17RY6 165 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 SESTD1Q86VW0 696 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 DHX37Q8IY37 1157 aaKnown RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 FANCBQ8NB91 859 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 GIMAP8Q8ND71 665 aaPredicted RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 TBC1D5Q92609 795 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 COL20A1Q9P218 1284 aa9.97□□□□□ -0.81
MDC1-204ENST00000422266 DDX41Q9UJV9 622 aaKnown RBP9.97□□□□□ -0.81
MDC1-204ENST00000422266 LTBP2Q14767 1821 aa9.96□□□□□ -0.81
MDC1-204ENST00000422266 LCTP09848 1927 aa9.96□□□□□ -0.81
MDC1-204ENST00000422266 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 OPLAHO14841 1288 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 MAFGO15525 162 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 ZBTB43O43298 467 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 PPP1R11O60927 126 aaPredicted RBP9.96□□□□□ -0.82
MDC1-204ENST00000422266 MMP3P08254 477 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 ITGB8P26012 769 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 RFC2P35250 354 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 IRX5P78411 483 aaPredicted RBP9.96□□□□□ -0.82
MDC1-204ENST00000422266 NBPF20Q3BBV1 942 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 FAM47CQ5HY64 1035 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 APOA5Q6Q788 366 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 NLRX1Q86UT6 975 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 FCHSD1Q86WN1 690 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 RETREG2Q8NC44 543 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 CAGE1Q8TC20 777 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 AFG1LQ8WV93 481 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 PPP1R12CQ9BZL4 782 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 PSTPIP2Q9H939 334 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 MLXIPQ9HAP2 919 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 IL23AQ9NPF7 189 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 STXBP5LQ9Y2K9 1186 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 TAF6LQ9Y6J9 622 aa9.96□□□□□ -0.82
MDC1-204ENST00000422266 DDX49Q9Y6V7 483 aaKnown RBP9.96□□□□□ -0.82
MDC1-204ENST00000422266 SPDYE3A6NKU9 549 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 NOP56O00567 594 aaKnown RBP9.95□□□□□ -0.82
MDC1-204ENST00000422266 FIBPO43427 364 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 ARIH2O95376 493 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 FGBP02675 491 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 ACTN1P12814 892 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 CSF2RAP15509 400 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 HOXA13P31271 388 aaPredicted RBP9.95□□□□□ -0.82
MDC1-204ENST00000422266 ICAM3P32942 547 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 PSMC6P62333 389 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 ARHGAP1Q07960 439 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 C9orf50Q5SZB4 431 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 CELF3Q5SZQ8 465 aaKnown RBP9.95□□□□□ -0.82
MDC1-204ENST00000422266 PCNX4Q63HM2 1172 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 MCTP2Q6DN12 878 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 PPP1R18Q6NYC8 613 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 TMTC3Q6ZXV5 915 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 MICU3Q86XE3 530 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 C7orf31Q8N865 590 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 SENP7Q9BQF6 1050 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 MYL10Q9BUA6 226 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 NOC4LQ9BVI4 516 aaKnown RBP9.95□□□□□ -0.82
MDC1-204ENST00000422266 USP26Q9BXU7 913 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 SENP2Q9HC62 589 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 MTMR10Q9NXD2 777 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 GRIN2DO15399 1336 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 FRMPD4Q14CM0 1322 aa9.95□□□□□ -0.82
MDC1-204ENST00000422266 FOSP01100 380 aaPredicted RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 CYP2C18P33260 490 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 EXOSC10Q01780 885 aaKnown RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 RAB30Q15771 203 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 RTN1Q16799 776 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 TMEM240Q5SV17 173 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 BLOC1S2Q6QNY1 142 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 METTL7BQ6UX53 244 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 SRBD1Q8N5C6 995 aaKnown RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 CCDC12Q8WUD4 166 aaPredicted RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 PIBF1Q8WXW3 757 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 HERVK_113Q902F9 699 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 COPS5Q92905 334 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 TNPO1Q92973 898 aaKnown RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 SPATA33Q96N06 139 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 INPP4AQ96PE3 977 aaPredicted RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.94□□□□□ -0.82
MDC1-204ENST00000422266 TRPV6Q9H1D0 765 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
MDC1-204ENST00000422266 BAZ2BQ9UIF8 2168 aaKnown RBP9.94□□□□□ -0.82
MDC1-204ENST00000422266 SCN10AQ9Y5Y9 1956 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms