RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 KAT2BQ92831 832 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 MYL10Q9BUA6 226 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 BCAS3Q9H6U6 928 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 CNNM2Q9H8M5 875 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 DDX41Q9UJV9 622 aaKnown RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 MYO9BQ13459 2157 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 ARHGEF15O94989 841 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 CYP21A2P08686 494 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 RAB30Q15771 203 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 KRT40Q6A162 431 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 HDAC6Q9UBN7 1215 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
NDUFA3-208ENST00000422029 MYH6P13533 1939 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 LOC102724159A0A0B4J2E5 919 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 E7EWF7 191 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 CA3P07451 260 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 TRDNQ13061 729 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 PWP2Q15269 919 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 TCTN1Q2MV58 587 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 DHX37Q8IY37 1157 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-208ENST00000422029 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 ZBTB5O15062 677 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 CYTH3O43739 400 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 KPNA6O60684 536 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 RGS20O76081 388 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 PSEN2P49810 448 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 HSD17B4P51659 736 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 ANTXR2P58335 489 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 SP2Q02086 613 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 HIC1Q14526 733 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 GRM4Q14833 912 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 RALYLQ86SE5 291 aaKnown RBP13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 WNT8BQ93098 351 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 IWS1Q96ST2 819 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
NDUFA3-208ENST00000422029 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 GGPS1O95749 300 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 RXRAP19793 462 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 SP4Q02446 784 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 MFSD10Q14728 455 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 GPNMBQ14956 572 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 WTAPQ15007 396 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 C7orf31Q8N865 590 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 RUFY2Q8WXA3 655 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 ARNTL2Q8WYA1 636 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 PCDHA11Q9Y5I1 949 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
NDUFA3-208ENST00000422029 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 ERICH2A1L162 156 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 ACTN1P12814 892 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 BFSP2Q13515 415 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 PGM5Q15124 567 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 DGKDQ16760 1214 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 NCOA7Q8NI08 942 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 SPATA33Q96N06 139 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 NECAB3Q96P71 396 aaPredicted RBP13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
NDUFA3-208ENST00000422029 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 LCHNA4D1U4 455 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 GCOM1H8Y6P7 765 aaPredicted RBP13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 SGSM2O43147 1006 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 NBNO60934 754 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 POLR2MP0CAP2 368 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 DEFB103AP81534 67 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 TFF2Q03403 129 aa13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
NDUFA3-208ENST00000422029 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms