RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZSCAN16Q9H4T2 348 aaPredicted RBP17.89■□□□□ 0.45
DDX55-203ENST00000421670 ASB14A6NK59 587 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 TDP2O95551 362 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 TOB1P50616 345 aaPredicted RBP17.88■□□□□ 0.45
DDX55-203ENST00000421670 IRF5Q13568 498 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 MAMDC4Q6UXC1 1216 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 VSIG10LQ86VR7 867 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 FBXO16Q8IX29 292 aaPredicted RBP17.88■□□□□ 0.45
DDX55-203ENST00000421670 CYP2W1Q8TAV3 490 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 MPHOSPH6Q99547 160 aaKnown RBP17.88■□□□□ 0.45
DDX55-203ENST00000421670 RTEL1Q9NZ71 1219 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 CHMP5Q9NZZ3 219 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 SYNGAP1Q96PV0 1343 aa17.88■□□□□ 0.45
DDX55-203ENST00000421670 FAM86B1E9PN63 330 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 CCNT1O60563 726 aaKnown RBP17.87■□□□□ 0.45
DDX55-203ENST00000421670 CYP3A4P08684 503 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 FAM86B2P0C5J1 330 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 CYP2C19P33261 490 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 STXBP2Q15833 593 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 OLFML2BQ68BL8 750 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 MORC4Q8TE76 937 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.87■□□□□ 0.45
DDX55-203ENST00000421670 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
DDX55-203ENST00000421670 PTCH2Q9Y6C5 1203 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 LOC102724159A0A0B4J2E5 919 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 B4DLN1 442 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 ADCY3O60266 1144 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 ZNF76P36508 570 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 USP11P51784 963 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 PWP2Q15269 919 aaKnown RBP17.87■□□□□ 0.45
DDX55-203ENST00000421670 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
DDX55-203ENST00000421670 FTOQ9C0B1 505 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDX55-203ENST00000421670 FRMPD3Q5JV73 1810 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 SLC37A4O43826 429 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 RGS20O76081 388 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 SNAI1O95863 264 aaPredicted RBP17.86■□□□□ 0.45
DDX55-203ENST00000421670 IGHA2P01877 340 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 ITGB5P18084 799 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 PRMT2P55345 433 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 TRIM32Q13049 653 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 RILPL1Q5EBL4 403 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
DDX55-203ENST00000421670 PCDHB6Q9Y5E3 794 aa17.86■□□□□ 0.45
DDX55-203ENST00000421670 IGLV3-22A0A075B6J6 115 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 EIF3JO75822 258 aaKnown RBP17.85■□□□□ 0.45
DDX55-203ENST00000421670 CIITAP33076 1130 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 MCM7P33993 719 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 TRAPPC10P48553 1259 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 CEP55Q53EZ4 464 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 PRR16Q569H4 304 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 XRRA1Q6P2D8 792 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
DDX55-203ENST00000421670 UIMC1Q96RL1 719 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 WDR11Q9BZH6 1224 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 DDX25Q9UHL0 483 aaKnown RBP17.85■□□□□ 0.45
DDX55-203ENST00000421670 PTPN22Q9Y2R2 807 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 UBIAD1Q9Y5Z9 338 aa17.85■□□□□ 0.45
DDX55-203ENST00000421670 ZNF174Q15697 407 aa17.84■□□□□ 0.45
DDX55-203ENST00000421670 PRAMEF19Q5SWL8 479 aa17.84■□□□□ 0.45
DDX55-203ENST00000421670 SEPT14Q6ZU15 432 aa17.84■□□□□ 0.45
DDX55-203ENST00000421670 CTU1Q7Z7A3 348 aaKnown RBP17.84■□□□□ 0.45
DDX55-203ENST00000421670 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
DDX55-203ENST00000421670 LENG9Q96B70 501 aa17.84■□□□□ 0.45
DDX55-203ENST00000421670 MXRA8Q9BRK3 442 aa17.84■□□□□ 0.45
DDX55-203ENST00000421670 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
DDX55-203ENST00000421670 CYP3A7-CYP3A51PA0A087WV96 503 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 STAM2O75886 525 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 HMGCRP04035 888 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 CYP3A7P24462 503 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 CEBPZQ03701 1054 aaKnown RBP17.83■□□□□ 0.45
DDX55-203ENST00000421670 MTMR1Q13613 665 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 PPP4R3AQ6IN85 833 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 MOXD1Q6UVY6 613 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 PLA2G4DQ86XP0 818 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 TRMT44Q8IYL2 757 aaKnown RBP17.83■□□□□ 0.45
DDX55-203ENST00000421670 SLAIN1Q8ND83 568 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 USP28Q96RU2 1077 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 ABHD16BQ9H3Z7 469 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 VTA1Q9NP79 307 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.45
DDX55-203ENST00000421670 WDR81Q562E7 1941 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 MEIS1O00470 390 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 NEMFO60524 1076 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 ARP10275 920 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 GCFC2P16383 781 aaKnown RBP17.83■□□□□ 0.44
DDX55-203ENST00000421670 DNM1Q05193 864 aaKnown RBP17.83■□□□□ 0.44
DDX55-203ENST00000421670 SEMA3FQ13275 785 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 ACVR2BQ13705 512 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 MFSD14CQ5VZR4 134 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 PXYLP1Q8TE99 480 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 SH3TC2Q8TF17 1288 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 MBOAT7Q96N66 472 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 JADE2Q9NQC1 790 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
DDX55-203ENST00000421670 KCNH7Q9NS40 1196 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms